| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6594 |
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| Symbol | |
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| ID | 6280162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2897898 |
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| End bp | 2899094 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617627 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_001890264 |
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| Protein GI | 187921232 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.394989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.110882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGT TCAATCCCGC ATTCGAAGCG CCGACCGGTT CGCCGATCCG CGAGCTCTTC
AAGTATCTGG CGCAGCCCGG CATGATCTCG TTCGCCGGCG GCTATCCGGC GAGCGATCTG
TTCGATCGTG AAGGGCTCGA CGCCGCTGCA TCGCGCGCGT CGCAACACGC TACCCTCTGC
CTGCAATACG GCCCCACCGA CGGCCTCCCT GTCCTCAAAG AACAACTCGC GCACCTGATG
GCGCGCCGCG GCGTGTCTTG CACGCCGCAA GACATGCTGG CGACGACCGG CTCGCAGCAA
GGCTTCGATT TGCTGCTGCG CGTGATGGTC GCGCCCGGCG ACGTGGTGCT GGTCGAGCAG
CCCGCTTATC CCGCGACCTT GCAGGCGCTC ACGCTGCAAG AGGCCGACGT GGTGACGATT
CCGGTCGATC AGGACGGCCT CGATATCGAC GCGCTCGCCG CGCTGCTCGA CTCGGGCACG
CTGCGCCGCG CGCCGAAGTT GTTGTACACG GTGCCCACGT TTGCAAATCC GACGGGCGCG
ACCTTGTCGT TCGAACGCCG CACGGCGTTG CTGAAATTGG CAGCGCGTCA CCGCTTTCTG
ATCGTCGAAG ACGATCCCTA CGGCGATCTG CGCTTCACTG GCGCCGCGTT GCCTTCGCTG
CTTGCGCTGA GCGAACAGGT GCCGGGATCG CGCGACTGGG TCGTGCATTT CTCCAGTCTC
TCGAAGATCG TCGCGCCGGG CTTGCGAGTG GGCTGGATGC TCGCGCACGC GGAGATTCTG
CGACGCTGCG TGGTCGCCAA GCAGACGGTC GATCTATGCA GCTCGCCGTG GACCCAGGCG
ATCGCCGCGG AGTATCTCGC GAGCGGCGCG CTGGAGCGGC ATTTGCCGCG CATCGTCGAC
GCCTACGCCG TGAAATGCCG CACGCTATGC GACGCGCTCG AAGCGCAACT GGCGGAACAG
ATCGCGTTTC ATCGTCCTGC CGGCGGCATG TTCGTATGGG CGCGATTGAA GGCCGGTCAG
AATGCGTCCG ATTATCTGCG CGCTTGTATC GAGCGCAATG TGATGTTTGT GCCGGGCGTC
GCTTTCTATA AAGACAATAT CGATTCGTCG GCACTGCGCT TGTCATTTGC CGCGCCTGGC
ATAGCGGATA TCGAAACGGG CGTGCAGAGA ATGAAGCAGG CGCTCGAACA TTTTTGA
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| Protein sequence | MFTFNPAFEA PTGSPIRELF KYLAQPGMIS FAGGYPASDL FDREGLDAAA SRASQHATLC
LQYGPTDGLP VLKEQLAHLM ARRGVSCTPQ DMLATTGSQQ GFDLLLRVMV APGDVVLVEQ
PAYPATLQAL TLQEADVVTI PVDQDGLDID ALAALLDSGT LRRAPKLLYT VPTFANPTGA
TLSFERRTAL LKLAARHRFL IVEDDPYGDL RFTGAALPSL LALSEQVPGS RDWVVHFSSL
SKIVAPGLRV GWMLAHAEIL RRCVVAKQTV DLCSSPWTQA IAAEYLASGA LERHLPRIVD
AYAVKCRTLC DALEAQLAEQ IAFHRPAGGM FVWARLKAGQ NASDYLRACI ERNVMFVPGV
AFYKDNIDSS ALRLSFAAPG IADIETGVQR MKQALEHF
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