Gene Bphyt_6578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6578 
Symbol 
ID6280370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2871526 
End bp2871876 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID642617606 
ProductIS66 Orf2 family protein 
Protein accessionYP_001890248 
Protein GI187921216 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.165462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0329516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCC TGGACGATGA ACTGAAGGTC TATGTGCATC GTGACGCCGT TGACTTCCGC 
AAGAGCATCA ACGGTCTCGC AGCCATCGTC GAGCAGTCAA TGAAGCTCGA TCCATTCGCG
CGTGCGGTTT ATGTGTTCAG CAATCAGCGG CGCGACCGCA TCAAGATGCT GCTGTGGGAC
CGTAACGGCT TCTGGCTTCT CATGAAACGC CTCGAGCAGG ACCGCTTCGT ATGGCCGCGC
AAGGAAGCGG TGCTCATGCT GCGAACAGAG CAACTTCACT GGCTACTGGA GGGCATCGAC
ATCGAAGCGA TGCGCGCGCA TCCGAGGCGC TATTATCAGC GCGTGACCTG A
 
Protein sequence
MFRLDDELKV YVHRDAVDFR KSINGLAAIV EQSMKLDPFA RAVYVFSNQR RDRIKMLLWD 
RNGFWLLMKR LEQDRFVWPR KEAVLMLRTE QLHWLLEGID IEAMRAHPRR YYQRVT