Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6578 |
Symbol | |
ID | 6280370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2871526 |
End bp | 2871876 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642617606 |
Product | IS66 Orf2 family protein |
Protein accession | YP_001890248 |
Protein GI | 187921216 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.165462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0329516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCGCC TGGACGATGA ACTGAAGGTC TATGTGCATC GTGACGCCGT TGACTTCCGC AAGAGCATCA ACGGTCTCGC AGCCATCGTC GAGCAGTCAA TGAAGCTCGA TCCATTCGCG CGTGCGGTTT ATGTGTTCAG CAATCAGCGG CGCGACCGCA TCAAGATGCT GCTGTGGGAC CGTAACGGCT TCTGGCTTCT CATGAAACGC CTCGAGCAGG ACCGCTTCGT ATGGCCGCGC AAGGAAGCGG TGCTCATGCT GCGAACAGAG CAACTTCACT GGCTACTGGA GGGCATCGAC ATCGAAGCGA TGCGCGCGCA TCCGAGGCGC TATTATCAGC GCGTGACCTG A
|
Protein sequence | MFRLDDELKV YVHRDAVDFR KSINGLAAIV EQSMKLDPFA RAVYVFSNQR RDRIKMLLWD RNGFWLLMKR LEQDRFVWPR KEAVLMLRTE QLHWLLEGID IEAMRAHPRR YYQRVT
|
| |