| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6556 |
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| Symbol | |
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| ID | 6277794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2846390 |
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| End bp | 2847820 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617583 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001890226 |
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| Protein GI | 187921194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0759041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00101657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCGATG TAAGCGGCTC TGAATTACGG GCGTTGATGG CGCGCGTGCC GTCGGTGGAA
AAGGTGATGG CGTCGGCCGA GTTCGCGGCG CTGCTCGCAG AATATGGCCG CACGCAGGTG
TTGGGCGCGG TGCGCGAAGC GCTCGACACA TGGCGCGCCG GCGCGCAATC GGGCGATGCG
TCCGTGAGCG CGCTCGACGT CGCGCAACTT AAGAGCGCGG TCGAAGCCGC GCTACGCAAG
CGCCACGAGT CGCGCTTGCG CAGCGTTTTC AATCTGACCG GCACGGTGCT GCATACCAAT
CTCGGTCGCG CATTGCTGCC CGACGAGGCG GTTCAGGCCG TCATGAAAGC GCTCACGCAA
CCCGCCAACC TCGAGTTCGA TCTCGGCACC GGTAAGCGCG GCGACCGCGA CGATCTGATC
GACGAGCTCA TCTGCGAATT GACCGGCGCC GAAGCGGCCA CCGTGGTCAA CAACAACGCG
GCCGCGGTGT TGCTCACGCT GTCCGCGTTG GCGTCGAAGA AAGAAGTCAT CGTGTCGCGC
GGCGAGCTGG TTGAAATCGG CGGTGCGTTC CGCATTCCCG ACATCATGAG CCGCGCGGGC
GCGAAATTGC GTGAAGTCGG CACGACGAAC CGCACGCATC TGAAGGACTA CGAGGAAGCC
ATCGGCCCGC AAACCGCGCT GCTGATGAAA GTCCACGCGA GCAACTATGC GATCAGCGGC
TTCACCAAAG AGGTCGGTCT GAATGAAATC GCGCCGCTCG CCCACGCGCG CGGCCTCGCG
GTTGCCGTGG ATCTCGGCAG CGGCACGCTG GTCGATCTGA GCCAATGGGG CTTGCCGCGC
GAGACGACGG TACGCGAAAC CGTCGAGGCC GGTGCGGACC TCGTCACGTT CAGCGGCGAC
AAGTTGCTCG GCGGTCCGCA AGCCGGTTTG ATCGTTGGGC GACGCGATCT GATCGCGAAG
ATCAAGAAGC ATCCACTCAA GCGCGCGTTG CGCGTCGGCA AACTGACGCT CGCGGCGCTG
GAGCCTGTGC TGCAGCTTTA TCGCGCGCCG GAGAGGCTCA CGGAGCGGCT CACTACGCTG
CGCTTATTGA CCCGTGCCGC CGATGACATC CGGCTCGCTG CGGATCGCGT GCAGCCCGCG
TTGCAGCACG CAGTCGGCGA ACGTTATGCG GTGACGGCGG AGCCGATGTT CAGTCAGATC
GGCAGCGGCG CGTTGCCGGT CGACGTGCTG CCGAGTTATG GTCTGGTCGT CAGAATGGCG
GACGGCAAAC GCGGCGGCCG TCAATTGCTT GCGCTCGAAA AGATGTTGCG GGAAATGGCG
CGGCCCGTGA TCGGTCGCAT CGCGGACGAT GCGTTGCGTC TCGATCTGCG CTGCCTAGAA
GCCGCCGACG AAGCGCAACT GGTCGAGCAA CTGAAAGGCG CGCGCGCATG A
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| Protein sequence | MSDVSGSELR ALMARVPSVE KVMASAEFAA LLAEYGRTQV LGAVREALDT WRAGAQSGDA
SVSALDVAQL KSAVEAALRK RHESRLRSVF NLTGTVLHTN LGRALLPDEA VQAVMKALTQ
PANLEFDLGT GKRGDRDDLI DELICELTGA EAATVVNNNA AAVLLTLSAL ASKKEVIVSR
GELVEIGGAF RIPDIMSRAG AKLREVGTTN RTHLKDYEEA IGPQTALLMK VHASNYAISG
FTKEVGLNEI APLAHARGLA VAVDLGSGTL VDLSQWGLPR ETTVRETVEA GADLVTFSGD
KLLGGPQAGL IVGRRDLIAK IKKHPLKRAL RVGKLTLAAL EPVLQLYRAP ERLTERLTTL
RLLTRAADDI RLAADRVQPA LQHAVGERYA VTAEPMFSQI GSGALPVDVL PSYGLVVRMA
DGKRGGRQLL ALEKMLREMA RPVIGRIADD ALRLDLRCLE AADEAQLVEQ LKGARA
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