Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6547 |
Symbol | |
ID | 6278143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2837285 |
End bp | 2838652 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642617577 |
Product | integrase family protein |
Protein accession | YP_001890220 |
Protein GI | 187921188 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00352142 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0182485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACAG ACATGCAGTT GCGGGCGTTG AAGCCCGCTG AGAAAATCTA CAAGGTGGCC GATCAGCAGG GGCTATATGC GGCGGTGACG CCGTCGGGTG CGGTGAGCTT CCGCTACGAC TACCGGGTAA ACGGTCGCCG TGAAACCTTG GTCATCGGCC GGTACGATCC ATCACTGTCT TCACGGAAGC CGCGGAAGCT GGACGAGCTC GGATTTGGGA TGGCAATCAG CCTCTCGGAA GCCCGACTTC TGCGCGACCA CGCCTACGGA GCAATCCAGC GCGGACACAG TCCGTCACGT GCAAAAGTCG AGAAACGGGC CGAGGCAGCC GAAGCGCTGA CATTTGGGAA ATGGGCGGAG AGATACTTCG CGGAGACCGC CCTCGCGGAT TCCACGCGTT CGATGCGTAA ATCGGTATAT GAGCGCAATC TTGCGTCCGA ATTCGGTCGG CTGAAATTGG AAGAGATCAC GCCAGTGCGA TTGATGGCGC GCTGCGAGAA AATCAAGGAG CGCGGGGCTG CTGCTCAAGC GGTTCACGCG CGGGAAATCG TGCTGCAGGT CTTCCGATTT GTTGAGGCTC GGGGTATTAA AGTAGACAAT CCGGCGGCAG CTATCCGTCC AAGCGCTATA GCGACATTTA AGGCACGCGA TAGGGCGCTG AGTCCGGAGG AGATTTACAT CTTCTTTAAC GCTTTGGATC TGACGCCAAC GACACCGACG TTGCGGCTTG CCACTAAATT TATGCTGCTG ACGTTGGTGC GCAAATCTGA ATTCATCGAT GCCACGTGGG ATGAGGTGAA TTTCGAGACC GCAACTTGGA CAATCCCGAA AGAGCGCATG AAGGCTAGGC GCCCTCATCA CGTATACCTA AGTGAACAGG CGTTGGAGAT TCTCGTCGCG TTCAAAACTT GTTTCGGATC CAGTCAGTAC CTGCACCCCG GACGGTATGA AACGGCCTCG CCGATCAGTG CGGCGACGTT GAACCGAGTC ATCGATAGTA CGGTGAAGTT GATCTGCGCC CGAGGCGACA CGTTTGAGCC GTTCACCGTG CATGACCTGC GGCGCACGGC AAGCACGCAC CTGCATGAAG CTGGCTTCAA CTCCGACTGG ATTGAGAAGT GCCTTGCGCA TGAACAGCGT GGTGTTCGGG CGATATATAA CAAGGCCGAA TACGCAGAGC AGAGAAGAGT GATGCTGCAG GCTTGGGCGG ACGCCCTGGA TGGCTGGATC AAAGATGGGC CGCGCGCGAC TTTTATGCAA GCGGGATTCA ATGGCATCGC TATGCTGACC AAATCTCTCC GAGGCGATGT GGAAGACAAT GATAGGAACG AAGTTCAACA AGCAGGCCGC GTCGACTGCT CCGAATAG
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Protein sequence | MLTDMQLRAL KPAEKIYKVA DQQGLYAAVT PSGAVSFRYD YRVNGRRETL VIGRYDPSLS SRKPRKLDEL GFGMAISLSE ARLLRDHAYG AIQRGHSPSR AKVEKRAEAA EALTFGKWAE RYFAETALAD STRSMRKSVY ERNLASEFGR LKLEEITPVR LMARCEKIKE RGAAAQAVHA REIVLQVFRF VEARGIKVDN PAAAIRPSAI ATFKARDRAL SPEEIYIFFN ALDLTPTTPT LRLATKFMLL TLVRKSEFID ATWDEVNFET ATWTIPKERM KARRPHHVYL SEQALEILVA FKTCFGSSQY LHPGRYETAS PISAATLNRV IDSTVKLICA RGDTFEPFTV HDLRRTASTH LHEAGFNSDW IEKCLAHEQR GVRAIYNKAE YAEQRRVMLQ AWADALDGWI KDGPRATFMQ AGFNGIAMLT KSLRGDVEDN DRNEVQQAGR VDCSE
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