| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6547 |
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| Symbol | |
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| ID | 6278143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2837285 |
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| End bp | 2838652 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617577 |
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| Product | integrase family protein |
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| Protein accession | YP_001890220 |
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| Protein GI | 187921188 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00352142 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0182485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACAG ACATGCAGTT GCGGGCGTTG AAGCCCGCTG AGAAAATCTA CAAGGTGGCC
GATCAGCAGG GGCTATATGC GGCGGTGACG CCGTCGGGTG CGGTGAGCTT CCGCTACGAC
TACCGGGTAA ACGGTCGCCG TGAAACCTTG GTCATCGGCC GGTACGATCC ATCACTGTCT
TCACGGAAGC CGCGGAAGCT GGACGAGCTC GGATTTGGGA TGGCAATCAG CCTCTCGGAA
GCCCGACTTC TGCGCGACCA CGCCTACGGA GCAATCCAGC GCGGACACAG TCCGTCACGT
GCAAAAGTCG AGAAACGGGC CGAGGCAGCC GAAGCGCTGA CATTTGGGAA ATGGGCGGAG
AGATACTTCG CGGAGACCGC CCTCGCGGAT TCCACGCGTT CGATGCGTAA ATCGGTATAT
GAGCGCAATC TTGCGTCCGA ATTCGGTCGG CTGAAATTGG AAGAGATCAC GCCAGTGCGA
TTGATGGCGC GCTGCGAGAA AATCAAGGAG CGCGGGGCTG CTGCTCAAGC GGTTCACGCG
CGGGAAATCG TGCTGCAGGT CTTCCGATTT GTTGAGGCTC GGGGTATTAA AGTAGACAAT
CCGGCGGCAG CTATCCGTCC AAGCGCTATA GCGACATTTA AGGCACGCGA TAGGGCGCTG
AGTCCGGAGG AGATTTACAT CTTCTTTAAC GCTTTGGATC TGACGCCAAC GACACCGACG
TTGCGGCTTG CCACTAAATT TATGCTGCTG ACGTTGGTGC GCAAATCTGA ATTCATCGAT
GCCACGTGGG ATGAGGTGAA TTTCGAGACC GCAACTTGGA CAATCCCGAA AGAGCGCATG
AAGGCTAGGC GCCCTCATCA CGTATACCTA AGTGAACAGG CGTTGGAGAT TCTCGTCGCG
TTCAAAACTT GTTTCGGATC CAGTCAGTAC CTGCACCCCG GACGGTATGA AACGGCCTCG
CCGATCAGTG CGGCGACGTT GAACCGAGTC ATCGATAGTA CGGTGAAGTT GATCTGCGCC
CGAGGCGACA CGTTTGAGCC GTTCACCGTG CATGACCTGC GGCGCACGGC AAGCACGCAC
CTGCATGAAG CTGGCTTCAA CTCCGACTGG ATTGAGAAGT GCCTTGCGCA TGAACAGCGT
GGTGTTCGGG CGATATATAA CAAGGCCGAA TACGCAGAGC AGAGAAGAGT GATGCTGCAG
GCTTGGGCGG ACGCCCTGGA TGGCTGGATC AAAGATGGGC CGCGCGCGAC TTTTATGCAA
GCGGGATTCA ATGGCATCGC TATGCTGACC AAATCTCTCC GAGGCGATGT GGAAGACAAT
GATAGGAACG AAGTTCAACA AGCAGGCCGC GTCGACTGCT CCGAATAG
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| Protein sequence | MLTDMQLRAL KPAEKIYKVA DQQGLYAAVT PSGAVSFRYD YRVNGRRETL VIGRYDPSLS
SRKPRKLDEL GFGMAISLSE ARLLRDHAYG AIQRGHSPSR AKVEKRAEAA EALTFGKWAE
RYFAETALAD STRSMRKSVY ERNLASEFGR LKLEEITPVR LMARCEKIKE RGAAAQAVHA
REIVLQVFRF VEARGIKVDN PAAAIRPSAI ATFKARDRAL SPEEIYIFFN ALDLTPTTPT
LRLATKFMLL TLVRKSEFID ATWDEVNFET ATWTIPKERM KARRPHHVYL SEQALEILVA
FKTCFGSSQY LHPGRYETAS PISAATLNRV IDSTVKLICA RGDTFEPFTV HDLRRTASTH
LHEAGFNSDW IEKCLAHEQR GVRAIYNKAE YAEQRRVMLQ AWADALDGWI KDGPRATFMQ
AGFNGIAMLT KSLRGDVEDN DRNEVQQAGR VDCSE
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