| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6541 |
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| Symbol | |
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| ID | 6279643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2830173 |
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| End bp | 2831045 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617572 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001890215 |
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| Protein GI | 187921183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.150151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC ATGACATTGA GCGGCCGGGG GCCACTCCGT GGCTTCTGTC TATACCTGCG
CTACTGCTTT TTGTAGGACT CCTCCTGGTC CCACTGATAC TCACTTTGAT GCTGTCTTTC
CGTGTGTTCA GTGACACGGA AGGGATTGAA GCCGCCTACA CGCTGAATAA CTACCTCGAA
GTAGTCACCG ACCCGTACTA CGGCGCGATT TTTCTACGCA CGGCCGGACT CGCGTTTGCA
GTGACCGCAG CTTCCATCTT GTTAGGCGTG CCAGAAACCA TCATCTTGGC GAGAATGCGA
CGTCCATGGC AGTCGCTGGC ACTATTGGTC GTCCTCGGGC CACTTCTCAT TTCGGTTGTG
GTTCGGACGC TTGGCTGGCA AATTTTGCTT GGAAACAACG GAGTAGTTAA CAGCATCCTG
CAGGCGCTGC ACATAACTGA CCGTCCGGTC CGTCTCGTGT TTACCATGAC TGGCATGGTC
CTCGCGTTGA CACACGTGCT TGTGCCTTTC ATGGTCATGT CAGTCTGGAC AACGATGCAA
AGACTCGACC CTCAGGTGGA ATGGGCCGGT CGCTCGCTGG GAGGCTCACC CATCAAAATT
TTTCGTCGCG TGATTTTCCC TCAGATTTTG CCTGGCGTAC TGTCCGGCTC AATCATCGTC
TTCGCACTTT CGGCATCCGC GTTTGCGACT CCCGCCCTAA TCGGCGGGCG CCGTTTAAAA
GTCGTTGCAA CGGCAGCTTA TGACGAGTTC CTCGGCACGC TCAACTGGCC GCTTGGTGCC
AGCATTGCGG TGTTGTTGCT GATTGCCAAT GTTGCAATTG TCATGGGATG CAGCAGGCTC
GCAGAACATC GTTTTAAGCA CATCTTCCAC TGA
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| Protein sequence | MATHDIERPG ATPWLLSIPA LLLFVGLLLV PLILTLMLSF RVFSDTEGIE AAYTLNNYLE
VVTDPYYGAI FLRTAGLAFA VTAASILLGV PETIILARMR RPWQSLALLV VLGPLLISVV
VRTLGWQILL GNNGVVNSIL QALHITDRPV RLVFTMTGMV LALTHVLVPF MVMSVWTTMQ
RLDPQVEWAG RSLGGSPIKI FRRVIFPQIL PGVLSGSIIV FALSASAFAT PALIGGRRLK
VVATAAYDEF LGTLNWPLGA SIAVLLLIAN VAIVMGCSRL AEHRFKHIFH
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