| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6539 |
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| Symbol | |
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| ID | 6278971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2828416 |
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| End bp | 2829096 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617570 |
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| Product | LrgB family protein |
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| Protein accession | YP_001890213 |
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| Protein GI | 187921181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.198287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACGA TAGTCACGCT GTTGTCCTCC ACCGTGGCTG CGTATCGCCT GAACACAAGC
ATCTATAAGC GTTGGCGCGG CATTTGGTCT TCCCCACTCA TACTCACGCC ACTGGCCATT
ATTGCCATCC TGCCTCTGGC AGGTGTGTCT TACGATACCT ACGTGGCCTC AACGCGCCCG
CTACTTTGGA TGATTGGTCC GCTGACGCTC GCTCTGGCGG TGCCGGTGTA CCAGCAACGA
GCTTTTATCC GTCACTGGTG GCCAGCGCTG GTTGTTGGAA CCATTGTCTC GGGTACGACC
GCGATGATTT CAGCCATTGA GCTCGCTCAC TTTTTTGACT TGCCTTCCAC CATCGCCCAT
AGCCTTGTTG CAAGGTCTGT ATCTTTGCCC TTCGCATTCG TGGTTGCGGA CGAAATATCC
GGCGCACGCG ACCTTACGAC ATTGTTCGTC GTCGTCAGCG GATTGGTTGG TATCGTGGTT
GGAGACGTCT TGCTTGTCCT CATGCGCTTG CGGTCCGCGC AAGCGCATGG GGCCACGCTT
GGGGCGATTG CTCAGGTAGC CGGCGTTGCA CGAGCTCACG ACCGTGGAAC TCCAAACGGC
GTAATGGCGA GCCTGACTAT GGTGTTCAGC GGGGCATTTG CGGTACTGGC TGCGCCCTTC
CTCGTACGGT TTCTGCAGTA A
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| Protein sequence | MITIVTLLSS TVAAYRLNTS IYKRWRGIWS SPLILTPLAI IAILPLAGVS YDTYVASTRP
LLWMIGPLTL ALAVPVYQQR AFIRHWWPAL VVGTIVSGTT AMISAIELAH FFDLPSTIAH
SLVARSVSLP FAFVVADEIS GARDLTTLFV VVSGLVGIVV GDVLLVLMRL RSAQAHGATL
GAIAQVAGVA RAHDRGTPNG VMASLTMVFS GAFAVLAAPF LVRFLQ
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