Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6529 |
Symbol | |
ID | 6277490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2816092 |
End bp | 2817630 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617560 |
Product | Integrase catalytic region |
Protein accession | YP_001890203 |
Protein GI | 187921171 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.277485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACC GGAGGTTCGA ATTGTTTGAG TACCGCCAAG TCCTTGTCCG TATGCGGCAA GGCGATTCCG ACCGCGACAT AGCGCGCGCC GGGCTCATGG GCCGCAAGAA GCTCACCGCG GTAAGGCGCA CCGCGCAAGA GCTCGGCTGG CTCGATCCGG CGCGGCCGCT GCCGCAAGAC ACCGTGATCG CAGGTCAGTT CGGCCGCACG CCGCACCTGC CCAGTACCTG CGTGTCGACA CTCGAACCCT TTCGCGAGCA GATCAGTAGC TGGTTTGACG CTGACGTACA GGGCACAACG ATTCACAGCG CGCTCAAGCG CAACCATGGC TACACCGGCA GCTATTCGGC GGTGCGCCGC TTCCTGAAGC ATCTGGGCGC CGAACGTAAT GTCACGGCGA CAACGATTCT GGACTTCCCG CCGGCCGATG CCGCGCAGGT CGACTTCGGC GCCGGTCCAG CGCTCATCCA CGAATCAGGT CACACGCTCA AGACGTGGTT CTTCGTCATG ACGCTATGCT GGTCGCGTCA TCAGTATGTC GAACTCGTGT TCGATCAGAC CATCGAGACG TGGCTGGCCT GCCACCGGCG CGCCTTCGAG TGGTTCGGCG GCTGCCCCGG GCGAATCATC ATCGACAACG CGAAGTGCGC GATCATCAGG GCATGCACGT ACGACCCCGA GGTCCAGCGC TCCTACGCGG GCCTCGCTGA AGGATATGGC TTCAGGATCG ATGCCTGTCC TCCGCACGAC CCGCAGAAGA AGGGCGTCGT TGAATCGGGC GTCAAATACG TCAAGAAGTC CTTCATGCCG CTGCGCGCGT TTCGTGATCT GCCGGATGCC AATCGGCAAC TGCGCGAATG GATCATGCGG GAAGCCAGCG TTCGTGAACA CGGCACGACA CGCGAACAGC CGCTGGCGCG CTTCGCCATC GAGAAGCCGC TATTGACGGC GCTGCCCGAT GTACCGCCCG TGCTCGCCGC ATGGTCCACG GTCACCGTTC ATCGTGACGC TCACATCCAG CATCACAAGG CGCTCTACTC GGTGCCGTTC GCCCTGGTCG GCAAGACGCT GTGGGTGAAG TCGACAGACA CGGTCGTGCA GCTGTTCCAT CAGCACGAAC TCGTTGCCAC CCATCCCCGG CTGCGCAAGC CAGGCGCACG CTCAACCGTC CGCGATCATC AGCCGCCGGC AGCGCAGGCG TGGCTCGAAC ACGATCCGCA ATGGTGTCTG GCGCAGGCCA AAGAAATCGG TCCTGCCTGC CACGCGCTGA TTCTGGCGCT CTTCAACGAT GAGGTACTCG TCAACCTGCG CGGTGCGCAG GGCATCGTCC GGCTTCGCGG CAAGGTGGGT GACGCGCGGC TGGATGCCGC ATGCGAACGG GCGCTGGCCC ATGCCAGTCC CAGGTGGCGA ACGGTCAAGA CGATTCTGGA CAAAGGTCTG GAGAGCGAGC CCATCGCAGA GTCCCCGCAA ACGCTCACCG ATACCTACGT CAACGGCGGC CGCTTCGGTC GCAATCTCCA ATCCCTGCTG ATCCACTAA
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Protein sequence | MANRRFELFE YRQVLVRMRQ GDSDRDIARA GLMGRKKLTA VRRTAQELGW LDPARPLPQD TVIAGQFGRT PHLPSTCVST LEPFREQISS WFDADVQGTT IHSALKRNHG YTGSYSAVRR FLKHLGAERN VTATTILDFP PADAAQVDFG AGPALIHESG HTLKTWFFVM TLCWSRHQYV ELVFDQTIET WLACHRRAFE WFGGCPGRII IDNAKCAIIR ACTYDPEVQR SYAGLAEGYG FRIDACPPHD PQKKGVVESG VKYVKKSFMP LRAFRDLPDA NRQLREWIMR EASVREHGTT REQPLARFAI EKPLLTALPD VPPVLAAWST VTVHRDAHIQ HHKALYSVPF ALVGKTLWVK STDTVVQLFH QHELVATHPR LRKPGARSTV RDHQPPAAQA WLEHDPQWCL AQAKEIGPAC HALILALFND EVLVNLRGAQ GIVRLRGKVG DARLDAACER ALAHASPRWR TVKTILDKGL ESEPIAESPQ TLTDTYVNGG RFGRNLQSLL IH
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