| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6525 |
|---|
| Symbol | |
|---|
| ID | 6278026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2812045 |
|---|
| End bp | 2812782 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642617557 |
|---|
| Product | protein of unknown function DUF969 |
|---|
| Protein accession | YP_001890200 |
|---|
| Protein GI | 187921168 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3819] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.120098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCG CCATAAATTT CTGGCCCCTA ATCGGCGTCG CCGTGGTTGC AGTCGGATTT
ATCCTCCGGC TCAATCCGAT GATGATTGTA TCAGTGGCAG CAGTAATTAC TGGCTTCCTG
GCTAAAATGT CGTTCCACGA TATTTTGGCA GTGATGGGTG TTGCTTTCAT AAAGTTCAGA
AATCTTCCCC TGATTACGCT TCTCCCGCTG CCTATTATCG GTCTCCTGGA GCGTCATGGA
TTACGAGAGT TCGTGCAAAC CGCAATCGGG AAGGTCCGAG CCGCAACTAC GGGACGATTC
CTCATTTGTT ACCTCTTCGT GCGCGAAACA TCCGCCTCCG TTGGGCTAGT GAGTTTAGGC
GGTCAAGCTC AAATGGTGAG ACCACTAATC GCGCCGATGG CCGAGAGTGT CGCCGAATCG
CAGCATGGGA AGCTTGCACC TCATCAGGCG CATCGCATTA GAGCGTTTGC CGCTGCTAGC
GACAATATTG GCTTATTCTT CGGCGAGGAT ATTTTCATCG CTTTTGGCGG CGTGCTGTTT
ATGCAAGCGG CTCTCCGAAC TGCGGGTATT GAAGTAAGTG CAATACAAAT TGCGTTCGCT
GGCATCCCAA CAGCAATATG CGTCTTTTTG ATTCATTCTT TTCGCCTCTA CCGACTAGAC
GCGTGGCTGG AGCGTGACAT TAAACGTTCG CTTGAACAGA CAAAGGTGCC GGCCGTGAAC
CAGGAGTGTC GTTCATGA
|
|---|
| Protein sequence | MNTAINFWPL IGVAVVAVGF ILRLNPMMIV SVAAVITGFL AKMSFHDILA VMGVAFIKFR
NLPLITLLPL PIIGLLERHG LREFVQTAIG KVRAATTGRF LICYLFVRET SASVGLVSLG
GQAQMVRPLI APMAESVAES QHGKLAPHQA HRIRAFAAAS DNIGLFFGED IFIAFGGVLF
MQAALRTAGI EVSAIQIAFA GIPTAICVFL IHSFRLYRLD AWLERDIKRS LEQTKVPAVN
QECRS
|
|---|
| |