Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6507 |
Symbol | |
ID | 6280119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2796448 |
End bp | 2797095 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642617541 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_001890184 |
Protein GI | 187921152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGC CTCTCGATTT CGCCACGCTT GCGGAGCAGT GCGCACCCCA GGTCTCGCCG GTCACGATGG CGGCGATCGT GCGGACCGAG TCCGGATTCA ATCCCTACGC GATCGGTGTT GTGCGTGGCC GGCTGCTACG TCAGCCGGGA AGCGCAGCCG AAGCGGTGGC GACGGCGCAC ACACTTGCGG CCGCCGGATG GAACTTCAGC GTCGGTCTCG CACAGGTCAA CCGCGCGAAC TGGAGCGCGT ATGGACTAAC CGAGCAGAGC GCCTTTGACC CCTGTCTCAA CCTGGCTGCG GGTGCCGCGG TTCTGGAGGG CTGTTTTATG GCCGCGCGCG CTGCGCGGGT GGACGGCAGG CGCGATCCAC AGGCTGCACT GCGGGCAGGG CTTTCGTGCT ACGCCAGCGG TAATTTTTCG GCGGGGTATC GCACCGGGTA TGTGCAGCGC GTGGTCGATA ACGCTCGCGT GCCTGCGTCG GCGCCGTCAC ACATAGTCGT GCCGACGATT GAGCCCATTC CGGTCGTTCC GGCGTTGCCG GTGGACCGGG CGCGGTCACA ACCGGCGGGT CATCAGATAT TGGAGCCGCC GGGCAACGCT TCCGATACGA ATCCCGGCGA GCCACGCGCA AGCGCCGTGG TCTTCTAG
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Protein sequence | MMLPLDFATL AEQCAPQVSP VTMAAIVRTE SGFNPYAIGV VRGRLLRQPG SAAEAVATAH TLAAAGWNFS VGLAQVNRAN WSAYGLTEQS AFDPCLNLAA GAAVLEGCFM AARAARVDGR RDPQAALRAG LSCYASGNFS AGYRTGYVQR VVDNARVPAS APSHIVVPTI EPIPVVPALP VDRARSQPAG HQILEPPGNA SDTNPGEPRA SAVVF
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