| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6504 |
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| Symbol | |
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| ID | 6279917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2793237 |
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| End bp | 2795702 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617538 |
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| Product | type IV secretion/conjugal transfer ATPase, VirB4 family |
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| Protein accession | YP_001890181 |
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| Protein GI | 187921149 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCG ACACGAGACA CGGTGCGGTC GCCCACCGCG AGGTGGCGAT TGCTGACCAC
ATTCCGTATT CAACGCACGT CACGGACCAT GTGATCAGGA CGCGGGAAGG TGACTACCTG
CAGATCTGGA AGCTCGCCGG CATCGCATTC GAGGCCGCCG ATCCGGTGGA CATCCTCGTT
CGTCACGATG GGTTCAACCA GCTCGTGCGT GCACTGCCTG GTGGTCACGG TGCACTCTGG
TCACACCGTC TGCGCCGGCG TGTTTCGGAC CACTTTGCCA CGCCTTATGG CAACCGCTTC
TGCCAGGAGT TGGCGACACG TTACTACGCG AGCTTCGCGG GTTACCGGAT GATGGCCAAC
GAGCTGTATC TGACGCTCGT CTATCGCCCC AACCGCACGA AGCTCGGACG CGTCTTCAGC
CGTGCGGCAC GCCGCACGCG CGACGACATC CGGCGCGACC AGCAGGAGGC GCTGAAAGTA
ATGGACGAAC TCGGCGCCCA GGTCGAGTCG GGGCTGAAGC CCTACGACCC GGTGGCGCTT
GGGGTCTATC ACAGGCCGAG TCCCTTCACG AAGCGGCCGC GCCGGTATTC GTCGGCGCTG
GAACTGCTCG GCTATCTCGT CAACGCAGTC TGGGAGCCTG AGCCGGTTCC TTCTGGCGTG
ATTCGGGAGG CATTGCCGAC TTCCCGTCTG TTCGTGGGTG TAGAAAATGT CGAGATCCGC
ATGCCAGCCA TGACGCGCTA CGCCGCGCTG TTGGACCTGA AGGACTATCC TGAAGAGACC
GAGCCGGGGA TGCTCAATGG CCTACTGTAT GGCGATTTCG AGTACATCGA GACACAAAGC
TTCACGATCC TCGACAAACC TGGCGCGAAG GAAGCGTTAG AGCGTCAGCG CAACCAGCTG
ATCGCTGGCG AGGATGTGGC CGTCTCCCAG GTCGAGGCGA TGGATCGTGC GCTCAACGAC
CTGATCAACG GCGATTTCGT GCTGGGTGAG TATCACTATT CGCTCGCGGT GCTGGCCGAT
ACGCCCGCGG CGGTCTCGAA GCACGTGGCG AAGGCCCGCA CGCAACTCGC CGATGGCGGT
TTCCAGACCA CCCTTATCGA TCTCGTGGCG GACGCTGCAT GGTTCGCACA GTTGCCGGGC
AACTGGCGTT ACCGGCCGCG CGAAGCGAAG CTGACGTCCC GCAATTTCTG TGGTCTTGCC
AGTCTTCACA ATTTCGCAAC CGGCAAACGC GACGGCAATC CGTGGGGCGA GGCGATCACG
ATCGTCAAGA CGCCGAGCGG CCAGCCGCTT TACCTGAATT TCCACGTTAC GCCCGAGAAG
CAGGATTCAG CCGACGAGAA GGCGCTTGCC AATACCCAGA TCATCGGTCA GGCCGGTGCG
GGCAAGACGG TCCTCGAACT GTTTCTGCTG GCGATGGCGA CGAAGTTCGG GCTGACCGCG
GTGCTGTATG ACAAGGATCG CGGCACCGAG ATCGCGATCC GTGCCATGGG CGGCATCTAT
ACGGTGTTCC GCCGTGGCGA ACCGACGGGG CTCAATCCGT TCCAGATGAC GCCGGACGAA
TCGGTGCTGG ACTTCTGGGA GCGGCTGGTG CGCAAGCTCG TCGATACGGG TGTGCCGTTG
TCTGCCAAAG ACGAATTGGA CATCTCGCGT GCGGTGCGTG AAGTCTCCCG CATGGAAAAG
CCGTTGCGCC GCCTGTCGAT GGTGCGACAA CTGTTGCCGA ATGTGGGCGA GAACAGTCTG
CACGCACGTC TCGCGAAATG GTGTGCAGGC GGGCGACTGG GCTGGGTCCT CGACAACCCG
AGAGACACCG TGGACCTCGC ACGCTCGAAG CTCTTCGGCT TCGACGATAC CGAACTGCTC
GATGACACGG AGGTTTCGAC GCCCGTCACG ATGTACCTGC TTCACCTGAC GGAAAGCCTG
ATCGATGGCC GGCGCTTCAT CTATGTGATG ACCGAATTCT GGAAGCGGCT GGGGGACCCC
GTCTTCACGG ACTTCGCGAA GAACAAACAG AAGACGATTC GCAAGCAGAA CGGGCTCGGC
ATTTTCGATA CCCAGTCACC GGCGGATATG CTGCGCAGCG ATATCGCACG GGCACTGATC
GAACAGAGTG CGACGTTCTT CTTCCTGCCG AATCCGCGGG CCGACTACGA CGACTACGTG
CATGGCTTCA AGCTGACGGA AGCCGAATTC AACATCGTGC GTAGTCTCGG CGAGAACAGC
CGCATGTTTC TGATCAAGCA AGGGCATCGG TCGGCGATCG GGAAACTCGA TCTCGCTGGG
CTCGGCGATG TGCTCGATGT CCTCTCGGGT ACGACCGACA ACATCCAACT CCTCGACACG
ATCCGTGCTC AGGCGGGGGA CGACCCCGAG GTATGGCTGC CGGTCTTCCA TGCGCAACTG
GCGAAGCGTC GGGCGACCCA GACAACCCGG CAAACCCAAG CACCCCGTGC AGGAGGTGCG
CAATGA
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| Protein sequence | MRADTRHGAV AHREVAIADH IPYSTHVTDH VIRTREGDYL QIWKLAGIAF EAADPVDILV
RHDGFNQLVR ALPGGHGALW SHRLRRRVSD HFATPYGNRF CQELATRYYA SFAGYRMMAN
ELYLTLVYRP NRTKLGRVFS RAARRTRDDI RRDQQEALKV MDELGAQVES GLKPYDPVAL
GVYHRPSPFT KRPRRYSSAL ELLGYLVNAV WEPEPVPSGV IREALPTSRL FVGVENVEIR
MPAMTRYAAL LDLKDYPEET EPGMLNGLLY GDFEYIETQS FTILDKPGAK EALERQRNQL
IAGEDVAVSQ VEAMDRALND LINGDFVLGE YHYSLAVLAD TPAAVSKHVA KARTQLADGG
FQTTLIDLVA DAAWFAQLPG NWRYRPREAK LTSRNFCGLA SLHNFATGKR DGNPWGEAIT
IVKTPSGQPL YLNFHVTPEK QDSADEKALA NTQIIGQAGA GKTVLELFLL AMATKFGLTA
VLYDKDRGTE IAIRAMGGIY TVFRRGEPTG LNPFQMTPDE SVLDFWERLV RKLVDTGVPL
SAKDELDISR AVREVSRMEK PLRRLSMVRQ LLPNVGENSL HARLAKWCAG GRLGWVLDNP
RDTVDLARSK LFGFDDTELL DDTEVSTPVT MYLLHLTESL IDGRRFIYVM TEFWKRLGDP
VFTDFAKNKQ KTIRKQNGLG IFDTQSPADM LRSDIARALI EQSATFFFLP NPRADYDDYV
HGFKLTEAEF NIVRSLGENS RMFLIKQGHR SAIGKLDLAG LGDVLDVLSG TTDNIQLLDT
IRAQAGDDPE VWLPVFHAQL AKRRATQTTR QTQAPRAGGA Q
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