| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6500 |
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| Symbol | |
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| ID | 6279601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2790482 |
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| End bp | 2791186 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617534 |
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| Product | VirB8 family protein |
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| Protein accession | YP_001890177 |
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| Protein GI | 187921145 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG GTGACGACTA TGGACGCGTG CTCGACATTG AGGCGTCACT GACACACCTG
CAGGAGCAAT CTGAGCGACG GGCCTGGCAC GTGGCGTACG GGGCGGTTGG TGTGGCCGTG
CTCAGTGTGA TGGCGCTCGC CGTCATGGTG CCGTTCTACC GGGTGGTGCC TTTGCCGATT
GAGGTCGATC GCCTGACGGG CGAATCGCAG GTGATCGATG TGCTCGACGC GCGTCACGTG
CATACGAGGG AAATCCAGGA CAAGCACTGG GTTGAAGCAT ACGTGCGCGA GCGTGAACGC
TATGACTGGG GGCTGCTGCA GATGGACTAC GACAGCGTGC TCGCCATGAG CGATGACGTG
GTCGCGCGCG ACTACCGGGG CACTTACAGC GGCCCCGATG CGCTGGACCG GCAGCTCGGC
CCGAACACGG AGCGGCGCGT GCGGATTCTT TCGACGACGC TGCCTCCCGA TGAACCCGGG
CACGCGGTTG TGCATATCGA GCGCACGACA TTCAAAAACG GTCAGGCGAA CGCCGAGCCG
ACGCAGCGCT TCGTCGTCAC GCTGGCTTAC GCCTATCGGC CGCCGGTTTT CACACGCGAA
AGCGTGGCCG TTGCGAATCC GTTCGGCTTC AAGGTGACGG CTTACAGCCG CGATCCTGAA
TATACGCCGC CGGCATCATC GTCGAGCGCG GGAGGTGCGC CATGA
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| Protein sequence | MSTGDDYGRV LDIEASLTHL QEQSERRAWH VAYGAVGVAV LSVMALAVMV PFYRVVPLPI
EVDRLTGESQ VIDVLDARHV HTREIQDKHW VEAYVRERER YDWGLLQMDY DSVLAMSDDV
VARDYRGTYS GPDALDRQLG PNTERRVRIL STTLPPDEPG HAVVHIERTT FKNGQANAEP
TQRFVVTLAY AYRPPVFTRE SVAVANPFGF KVTAYSRDPE YTPPASSSSA GGAP
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