| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6495 |
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| Symbol | |
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| ID | 6279833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2785143 |
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| End bp | 2786894 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617529 |
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| Product | TRAG family protein |
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| Protein accession | YP_001890172 |
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| Protein GI | 187921140 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CCGCACTGAT TGATGCGCCG GCTATCGTCG TCGGGATATG GCGGGGGCGC
TATCTGCGCT TTACCGGGCA GCAGTTCGTG CTGCTCGCCG CGCCCGCGCG CTCGGGCAAG
GGGGTCAGCA TCGTGATCCC GAACCTGTTG AGTTACCCGG ATTCGGTTGT GGTCCTCGAC
ATCAAGCGCG AGAACTACGC GATTACCGCG GGCTTCCGGC TTGCACACGG GCAGGAGGTC
TATCTCTTCG ACCCGTTTGC GGAAGATGGC CGCACGCACC GGTTCAATCC GCTGTCATCC
ATTTCGGATG GACTATTCCG CGTAGGCGAC ATTCTGGCGA TCGGCTACGC CCTCTATCCG
CCAAATGGCC ACGATGACTT CTGGAAGGAC CAGGCACGTA ACCTGTTTCT CGGCATCGTC
CTGCTGCTCA GTGAGTGGCG TGACGCGCGG CGCACGGGCA GGGGCGAATC CATCCCTGAC
TACCCCGTCA CGATGGGCGA GGTGTTGCGG CAGTCGTCGG GCCACGGCAT GCCGGTCAAG
GCGTACCTGC AGCGCGCACT CGTCCAGCAT CGCGCTCTGC TGAGCGGCGC ATGCGTCGAT
GCGCTGAACC GTTTCCTGTC CAACGACGAC AAGGTGCTGG CGAGCATTCT TGCGACATTC
CACGCACCGC TCACGATCTG GGCAAACCCC ATCGTCGACG CGGCGACGAG CGCTAACGAT
TTTGATCTGC GCGACGTGCG TCGGCGTCGC ATGTCGGTCT ATATCGGAAT CACGCCCGAT
CACCTGTCGG AAGCGGCACT GCTCGTCAAC CTCGTGTTCT CGCAGCTCGT CAACCTGAAC
ACAAAACAGT TGCCGGAGGC AGATCCAACC CTGCGGTTCC AGTGCCTGCT GTTGCTCGAC
GAGATGACGG CAATCGGCAA GATCCATATC ATCGCGCGCG CCGTGGCCTA CATGGCGGGC
TACAACCTGC GTCTGCTCTC TGTCGTGCAG TCGATTGCGC AACTCGAGTC GGTCTACGGC
CGGTCCGATG CACGTACCTT CCTCACGAAC CACGCGATGC AGATCCTCTA TGCGCCGCGT
GAGCAGAAGG ACGCGAACGA CTACTCGGAG ATGCTCGGCA CCTTTACTGA CCAGTCGCGC
AGCGTCAGTC GCCCGAACAC GATGTTCGGC GGCCGGGGCG GATCGAGCGA GAGCATGTCC
GAGCAACGTC GCCCGCTGCT GCTGCCGCAG GAACTCAAGG AACTGGGGCG TGACAAGGAA
ATCATCGTGC TGGAGAACAC GAAGCCGATT CTCGCCGACC GGATCTGCTA CTGGCGCGAT
CCGGTGTTTG CTTCGCGGGT CTCGATTGCA CCATCGGTGC CGGCCATGGA TCTGGCCCGC
TTCACGGCAC AGATCGAACG GCGTTTGCGC GAGGTCGAGT CCGACGAGGT CGAGTCCGAC
GAGATCGATC CGGAATGCGC GGGTCTCCTT CATCTGTCGG CTGAGTATCT GGAGGTGCTG
CAGGCCTGGG ACCCGCGCGA TCTGCCGCCG CGCCTTGCCG ACCTCAGTGA GGACGAGGTC
GCGGCATACG TTGAACGGCA CTTCATGCTG CTGGGCGTTC CGGCCAGGCA TATCGGACAG
GCGACACGCC GACTGTCGGT CGCAGACCTC GACGTCGCGG AGCTGGTGCC GCCAAAGTCA
GCACGTGAGC GGCGCGGTCA GGGGACTCGT GCCGGAACGA ACAAGGCATC GATTAAGGGA
GCAAGGCGAT GA
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| Protein sequence | MNAPALIDAP AIVVGIWRGR YLRFTGQQFV LLAAPARSGK GVSIVIPNLL SYPDSVVVLD
IKRENYAITA GFRLAHGQEV YLFDPFAEDG RTHRFNPLSS ISDGLFRVGD ILAIGYALYP
PNGHDDFWKD QARNLFLGIV LLLSEWRDAR RTGRGESIPD YPVTMGEVLR QSSGHGMPVK
AYLQRALVQH RALLSGACVD ALNRFLSNDD KVLASILATF HAPLTIWANP IVDAATSAND
FDLRDVRRRR MSVYIGITPD HLSEAALLVN LVFSQLVNLN TKQLPEADPT LRFQCLLLLD
EMTAIGKIHI IARAVAYMAG YNLRLLSVVQ SIAQLESVYG RSDARTFLTN HAMQILYAPR
EQKDANDYSE MLGTFTDQSR SVSRPNTMFG GRGGSSESMS EQRRPLLLPQ ELKELGRDKE
IIVLENTKPI LADRICYWRD PVFASRVSIA PSVPAMDLAR FTAQIERRLR EVESDEVESD
EIDPECAGLL HLSAEYLEVL QAWDPRDLPP RLADLSEDEV AAYVERHFML LGVPARHIGQ
ATRRLSVADL DVAELVPPKS ARERRGQGTR AGTNKASIKG ARR
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