| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6458 |
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| Symbol | |
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| ID | 6279835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2730124 |
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| End bp | 2731107 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617493 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001890136 |
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| Protein GI | 187921104 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00230301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000716743 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAAA AATTTAGAGT GCTGGCAACC AGCCCGATTC ACCTATCGGC ATTGCCGATT
CTAGAGCCGA GTTGCGAGCT CGTCGTCGCG CCAGATGATA GCGAAGAGAC CCTGCGCAAG
TTCGTCGCGG ATGCGGATGC ACTAATCGTC CGCGTACGCC TGCCTGATGA CATTTTTGAT
CACGCTCCTC GTCTTAAGGC ATGCGTGCGT CACGGAGTTG GTCTCGATTT CATTCCCGTT
GAGCGTGCGA CCCGTGCAGA TATTGCGGTC GCAAACTTGC CGGACTCAAA TACGCAGGCG
GTAGCCGAGC ACGTGGTGGG TGCAATCCTT GCGATGGCCC GCGGCTTCGA CCGGCTTCCC
AGGGCTTGGC GCAACGACGG CTGGCTGGTT CGACAGACAT TCCAGGGCAT CGAGCTGCGT
GACCGCACTG TCGGCATCGT TGGTCTCGGA CGAATCGGCC TGCAGGTTGC TGCAGCACTG
CATCACGGAT TCGGTATGCG CGTGCTTGGC TGCGACAACG GCGCCCGCGA AGGATTGCCC
TCTTACGTCG ACCAAACCTC GATCGAAAAT GTGTTCTCGG GCTCCGACTT CATCACATTG
CACGCCCCCT TGGTCAAATC AACCCGGCAT TTGGTAAATG CCGAACTGCT CTCGCTTGCG
AAGCCCGGCG CGCTGCTCGT GAACGCCGCG CGCGGCGGTC TGATCGATGA TGACGCCCTC
GTCGCCGCAC TGCGCTCCGG TCAGATCGGC TGCGCTGCAC TGGACGTGTT TGAACCAGAG
CCATTGCCCC CCGATCACCC CTACTGGTCA ATCGACAATG TGTTGCTGAC GCCACACGTT
GCTGCGTTCA CTTCCGAAGG TCTAGTAAGA ATGAGTACGG GTGCAGCTCG CGCCGTCGTC
GAAATCCTTC ACGGCCGACG CCCCGAGCAT CTAGTAAACG AAGAGGTATG GCCACGTTAT
CTCGAACGCC GCGCTACGCG CTGA
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| Protein sequence | MPEKFRVLAT SPIHLSALPI LEPSCELVVA PDDSEETLRK FVADADALIV RVRLPDDIFD
HAPRLKACVR HGVGLDFIPV ERATRADIAV ANLPDSNTQA VAEHVVGAIL AMARGFDRLP
RAWRNDGWLV RQTFQGIELR DRTVGIVGLG RIGLQVAAAL HHGFGMRVLG CDNGAREGLP
SYVDQTSIEN VFSGSDFITL HAPLVKSTRH LVNAELLSLA KPGALLVNAA RGGLIDDDAL
VAALRSGQIG CAALDVFEPE PLPPDHPYWS IDNVLLTPHV AAFTSEGLVR MSTGAARAVV
EILHGRRPEH LVNEEVWPRY LERRATR
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