| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6448 |
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| Symbol | |
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| ID | 6280232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2719403 |
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| End bp | 2720071 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617483 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001890126 |
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| Protein GI | 187921094 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000264064 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.59583e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAACTG AAGCCTCATC CGACGAAACG ACTAACCCTT CGCCCCGCAA ACTGCGGGTG
CGCACCGTCA AGACCAATAC ACGCGACGGA GCGTTGGTTC AGGAGCGACG CGACGTACTG
ATTCGTGCCG CCATCAAGGT GTTTATTGAA AAAGGCTTTC ATGAGGCCAC CGTGCGCGAC
ATTGGCCGCG TCGCCGACAT GACGCAAGGC ACCATCTATA ACTACGTTAA ATCGAAGGAC
GACATCCTTT ATCTGGTCTG CGACAGGATC ATCGCGGAAT ACCAACTGAA GGTGAAACAG
GCGCTCGACG AGACGGCCGA CGCGCGAACC CAGGTCTCCG CCGCGTTGCG CACCGTTGCG
CGCATCATGT ACGAACATCA GGATGAGATC ATGCTTATCT ACCAGAATAG CCATCTGCTA
GACAATCGCT CCCGCAAGGT GATTCTTGCA AGAGTCGAAG AATTCATCGC GATGTTCGAA
AACATCCTTG CCAAGGCCAG CGAACAGACC AGGATCGACT TTGGCAATCT GCATATCGCC
GCGAACATCG TGACCTTTCT ACCAACCATG ATCGCGCTGC GCCGCTGGTC ACTGCGCGAT
CGCGCAAAAC CCGAGGAAGT GATCGAGACG CTCAGTACGT TCATGGCACG CGGACTTGGC
TTTAATTAA
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| Protein sequence | MKTEASSDET TNPSPRKLRV RTVKTNTRDG ALVQERRDVL IRAAIKVFIE KGFHEATVRD
IGRVADMTQG TIYNYVKSKD DILYLVCDRI IAEYQLKVKQ ALDETADART QVSAALRTVA
RIMYEHQDEI MLIYQNSHLL DNRSRKVILA RVEEFIAMFE NILAKASEQT RIDFGNLHIA
ANIVTFLPTM IALRRWSLRD RAKPEEVIET LSTFMARGLG FN
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