| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6435 |
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| Symbol | |
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| ID | 6279728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2704359 |
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| End bp | 2705606 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617472 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001890115 |
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| Protein GI | 187921083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00145178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGGTA CTCTTTCGGG AATCCGGGTA CTCGATCTGA GCCGCATTCT GGCGGGCCCT
TGGTCCACGC AGTTGCTCGC GGATCTCGGT GCGGATGTGG TCAAGGTCGA GCGACCCGGG
GGGGGCGATG ATACGCGTGC ATGGGGGCCG CCATTCGCGC CTGGTGGTGA CGGCACTCCT
AGCGCTGAGT CTGCATATTT TCTGGCTGCC AACAGGGGTA AGCGTTCCAT CGCTGTCGAC
TTCAGTGTGG CCGAGGGCCA GGACATTGTG CGTGAGTTGG CAAAGACCGC GGATGTCGTT
ATCGAAAACC TCAAATGCGG CGACATGCAA AGGTATGGTC TCGACTACGA AAGTCTCCGC
TGTTTGAATC CGAAGCTGAT TTACTGTTCT ATCACAGGCT TTGGCCAAAC AGGACCGTAT
AGCAAGCGGG CAGGATACGA TTTCGTCATT CAGGCTATGG GTGGCTTGAT GAGTATCACG
GGTGAGAGCG ACGGGAGGCC GGGAGGCGGA CCTCAGAAGT GCGGCGTGCC GATTTCCGAC
ATGATGACCG GCATGTATGC CACAGTCGGA ATTTTGAGTG CGCTGCACGA ACGTCAGACG
AGTGGTGAGG GGCAATACAT CGACATGAGT TTGCTCGACA CGCAAGTCGG CTGGCTGGCG
AATCATGGGC TGAATTACCT TGTATCCGGA AGTCCCGCAA GACGTTGGGG AAACGCCCAC
CCTAACCTCT GTCCGTACCA GGCGTTCCCG GCTATCGACG GGTATTTGAT CATAGCGGTT
GGAAACGATC GGCAATTCCA GTCGCTATGT CGGGTACTGT CGATGTCGAC AGTCGCGAGT
GATTCGCGAT TTTCGACAAA CAGCGGCAGA TTAGCAAACC GTGATTCTCT TGTGGAATTG
ATAGAGCAAC GTCTCCGTAC GGGGAATCGA GATGAATGGC TCGAGATGCT TGAGCAAGCG
GGAGTACCTG CTGGTCCTAT TAATACAGTA GCGGAAGCGC TCGCGGATCC TCAAGTGATC
AGTCGTGGAA TGGTTTTTTC AATGAAGCAT ACGATGGGGG CCTCCGTGCC ACAAATTGCG
AATCCAATCA AGTTTTCGCG CACGGCCATT GAGTATCATC GTCCACCACC TATGCTTGGT
GAACACACGG CAGAAGTTCT CGCGTCTATC GGCTTGACCG CCGGAAATCT GGATGAATTG
CATGCTGCGG GAGTGATTCA CGAGCCCGGT CGTCTCCTTT TCGAGTAA
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| Protein sequence | MAGTLSGIRV LDLSRILAGP WSTQLLADLG ADVVKVERPG GGDDTRAWGP PFAPGGDGTP
SAESAYFLAA NRGKRSIAVD FSVAEGQDIV RELAKTADVV IENLKCGDMQ RYGLDYESLR
CLNPKLIYCS ITGFGQTGPY SKRAGYDFVI QAMGGLMSIT GESDGRPGGG PQKCGVPISD
MMTGMYATVG ILSALHERQT SGEGQYIDMS LLDTQVGWLA NHGLNYLVSG SPARRWGNAH
PNLCPYQAFP AIDGYLIIAV GNDRQFQSLC RVLSMSTVAS DSRFSTNSGR LANRDSLVEL
IEQRLRTGNR DEWLEMLEQA GVPAGPINTV AEALADPQVI SRGMVFSMKH TMGASVPQIA
NPIKFSRTAI EYHRPPPMLG EHTAEVLASI GLTAGNLDEL HAAGVIHEPG RLLFE
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