Gene Bphyt_6414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6414 
Symbol 
ID6278637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2679779 
End bp2680555 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content57% 
IMG OID642617456 
ProductABC transporter related 
Protein accessionYP_001890099 
Protein GI187921067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.476451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA ATTCCATTCG CCTTTCAGTC AAAGGCGTGA GCAAGCGATT TGGTGGCCTG 
CAAGCACTCT CGGATGTCGG GCTGCAGATT GACGAAGGCA GCATCTATGG CCTCATCGGC
CCAAACGGTG CGGGCAAGAC CACCTTCTTC AATGTCATAA CGGGGCTCTA CTCGCCAGAC
TCCGGCGAGT TCGAGCTCGA CAACAAGCCG TATACGCCCA CTGCGGTACA TAAAGTAGCG
AAAACAGGCA TCGCACGGAC ATTTCAGAAC ATTCGTCTTT TCGGCGGGAT GACCGCGCTT
GAGAACGTGA TGGTTGGGCA GCACGTCCGC ACAAAGCAAG GTCTCATTGG CGCTGTGCTC
CAGACTTTGT CCGAGCGGCG TGAAGAGCGA GCGATTCGGG AACGGGCAAT CGAACTGCTC
GACTACGTGG GAATCGCACA GTACGCGGAC TATACAGCGC GCAACCTGTC GTATGGCCAT
CAGCGCCGGC TGGAAATTGC ACGAGCCCTC GCGACCGACC CGAAGCTGCT CGCGCTCGAT
GAACCCGCCG CTGGCATGAA TGCAACCGAG AAGCTCGAAC TTACCGGGCT TCTAAAGCAG
ATTCGCGCAG ATGGCCGCAC GATTTTGCTT ATCGAACACG ACGTGAAGCT GATGATGGGC
GTATGCAACG GGATGACCGT GCTCGACTAC GGGAAGGTGA TTGCCGAAGG GCTACCTCGC
GACGTGCAGA GAGACCCAAA AGTGATTGAA GCGTATCTGG GTACGGGGGT GCAGTGA
 
Protein sequence
MKKNSIRLSV KGVSKRFGGL QALSDVGLQI DEGSIYGLIG PNGAGKTTFF NVITGLYSPD 
SGEFELDNKP YTPTAVHKVA KTGIARTFQN IRLFGGMTAL ENVMVGQHVR TKQGLIGAVL
QTLSERREER AIRERAIELL DYVGIAQYAD YTARNLSYGH QRRLEIARAL ATDPKLLALD
EPAAGMNATE KLELTGLLKQ IRADGRTILL IEHDVKLMMG VCNGMTVLDY GKVIAEGLPR
DVQRDPKVIE AYLGTGVQ