Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6414 |
Symbol | |
ID | 6278637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2679779 |
End bp | 2680555 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642617456 |
Product | ABC transporter related |
Protein accession | YP_001890099 |
Protein GI | 187921067 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.476451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA ATTCCATTCG CCTTTCAGTC AAAGGCGTGA GCAAGCGATT TGGTGGCCTG CAAGCACTCT CGGATGTCGG GCTGCAGATT GACGAAGGCA GCATCTATGG CCTCATCGGC CCAAACGGTG CGGGCAAGAC CACCTTCTTC AATGTCATAA CGGGGCTCTA CTCGCCAGAC TCCGGCGAGT TCGAGCTCGA CAACAAGCCG TATACGCCCA CTGCGGTACA TAAAGTAGCG AAAACAGGCA TCGCACGGAC ATTTCAGAAC ATTCGTCTTT TCGGCGGGAT GACCGCGCTT GAGAACGTGA TGGTTGGGCA GCACGTCCGC ACAAAGCAAG GTCTCATTGG CGCTGTGCTC CAGACTTTGT CCGAGCGGCG TGAAGAGCGA GCGATTCGGG AACGGGCAAT CGAACTGCTC GACTACGTGG GAATCGCACA GTACGCGGAC TATACAGCGC GCAACCTGTC GTATGGCCAT CAGCGCCGGC TGGAAATTGC ACGAGCCCTC GCGACCGACC CGAAGCTGCT CGCGCTCGAT GAACCCGCCG CTGGCATGAA TGCAACCGAG AAGCTCGAAC TTACCGGGCT TCTAAAGCAG ATTCGCGCAG ATGGCCGCAC GATTTTGCTT ATCGAACACG ACGTGAAGCT GATGATGGGC GTATGCAACG GGATGACCGT GCTCGACTAC GGGAAGGTGA TTGCCGAAGG GCTACCTCGC GACGTGCAGA GAGACCCAAA AGTGATTGAA GCGTATCTGG GTACGGGGGT GCAGTGA
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Protein sequence | MKKNSIRLSV KGVSKRFGGL QALSDVGLQI DEGSIYGLIG PNGAGKTTFF NVITGLYSPD SGEFELDNKP YTPTAVHKVA KTGIARTFQN IRLFGGMTAL ENVMVGQHVR TKQGLIGAVL QTLSERREER AIRERAIELL DYVGIAQYAD YTARNLSYGH QRRLEIARAL ATDPKLLALD EPAAGMNATE KLELTGLLKQ IRADGRTILL IEHDVKLMMG VCNGMTVLDY GKVIAEGLPR DVQRDPKVIE AYLGTGVQ
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