Gene Bphyt_6411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6411 
Symbol 
ID6280419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2676634 
End bp2677422 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID642617453 
ProductHydroxypyruvate isomerase 
Protein accessionYP_001890096 
Protein GI187921064 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAT ATGCCGCCAA CCTTGGAATG TTGTGGTCCA GCCTCCCACT TCTCGAACGT 
ATCGAAGCCG CGGCTCGTGC GGGCTTCCGT GCGGTCGAGA TGCACTTTCC ATACGATGTG
GTACCGGGAA AGCTTCGTGA CTCCATTGAG CAGCATGAAC TAACGCTACT TGGAATCAAC
TCGCCGCCCG GCAATCTCGC CGCAGGCGAG CTGGGTCTTG CAGCCGTTCC TGGTCGCGAA
GCAGATTTTA TTGAGAGCAT GCGGGTCGCT TTCAACTATT GTCGGGAGTC GGGTGCGCAG
GCGCTTCATA TCATGGGAGG GAACACTTCC GGCTTTCCGC GCAAGGCATG CCTTGAAACT
TTTCGGTCAA ATATTCTGCG TGCGGCAGAT CTCGCTGAGT CGCGCGATAT CCAGCTACTT
CTCGAACCGC TTAACGAGGC GCGTCATCCG TACTACTTCT ATCATCATGT CGATGAGCTT
GCAGAAATTC TGCACTGGAT ACGGCATCCA CGCCTGGAAA TCCAGTTCGA CACCTACCAC
GTTGGAATGG AAGCCAACGC CGTATCTGAG GTTTTGCGGA GAAACTGGTC GATGATCGGG
CACATTCAGA TCGCCGCGGT TCCCGATCGA AGCGAACCGG ACTCAGGCGA CGTAGACATC
GGGAAAGTGC TTCGTGAAGC AGAGTCACTC GGTTACGCTG GCTGGATTGG GTGTGAATAC
CAGCCTGGCG GGTCTGTCGA GGAGGGCCTT AGCTGGAGGC AGGACGCCAG ATTTGCAGAA
ACCGTCTAA
 
Protein sequence
MRRYAANLGM LWSSLPLLER IEAAARAGFR AVEMHFPYDV VPGKLRDSIE QHELTLLGIN 
SPPGNLAAGE LGLAAVPGRE ADFIESMRVA FNYCRESGAQ ALHIMGGNTS GFPRKACLET
FRSNILRAAD LAESRDIQLL LEPLNEARHP YYFYHHVDEL AEILHWIRHP RLEIQFDTYH
VGMEANAVSE VLRRNWSMIG HIQIAAVPDR SEPDSGDVDI GKVLREAESL GYAGWIGCEY
QPGGSVEEGL SWRQDARFAE TV