| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6408 |
|---|
| Symbol | |
|---|
| ID | 6278148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2673800 |
|---|
| End bp | 2674759 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642617450 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001890093 |
|---|
| Protein GI | 187921061 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACTC CGATAGAACG ATTCTTTTCC AGCGGGCTGA GGCTTTCGCA TCTGCGTCTG
CTCGTTGCGC TCGCCGACCT GAAACAGGTC ACGAAGGTCG CAGCGGCTTT CAATGTCACG
CAACCAGCCG TCTCGAAGCA GATTGGTGAA ATAGAGCAGG CATTGGGCGC CGCAGTGACA
GAGCGTGTCG GAAAGGCGGT TTTTTTAACC GATGTCGGAG CCGTCCTTGC ACGCCGCGGT
CGAGAAATTC TCCGCCAGGT CGGGCTGGCG CAAAAAGATG TCGCCTCACT TGTCACCGGT
ACGGCCGGAC GTGTGACGTT GGGCTCGGTC ACGGCTGTGC CGCCTTCATT CATCTCACAG
TCGATAATGA GCTTTTTGAC CAGAGCCCCC GCGGCCTCGG TCGAGTTCGT AGAGGCGCCA
CTGGATGAAC TGCTGGAGAT GCTGCGAATC GGGAAAATCG ATCTGGTACT CGCTCGTGCG
CGGGGAAAAG ACGACCCGAC GCTCGTGACG GAAACGTTGT ATAGCGAGCC ATTCGTGTTC
GTCTCCGGCC CTTCTCATGC ACTCGCGAAC GGCAGATCCG TCACGGTGAA GGACTTGAAG
GAATTCATGT GGCTCGTGCC TCAACAAGGC AGCCCATCCT ACATCGCGCT CGCACACTTG
ATGGAACTTG AGGGATTGAA CATCGACGAT TCGTGTGTCG AATCGAGTTG TATTGCGTTG
AACGTAGAAC TCATGGCGCG AGGTCCGTTC GTTTCCATCC TTCCGCTGTC GCACGCAACC
GAGTATGCGG CGCGTGGACG GCTATCTTTG ATGAACACAC CATCGCTTAC CCAGCTTGGC
GAGGTGGTGC TTTATCGCCG AGCGGATCTC GATTCTCCGG CACCGTTGCT TCTCGGAGAA
TGCATCCGGG AAGAGGCGGT ATCGAACTTA CCCGGGATAT CGTCTGACCT GACCGGCTAG
|
|---|
| Protein sequence | MFTPIERFFS SGLRLSHLRL LVALADLKQV TKVAAAFNVT QPAVSKQIGE IEQALGAAVT
ERVGKAVFLT DVGAVLARRG REILRQVGLA QKDVASLVTG TAGRVTLGSV TAVPPSFISQ
SIMSFLTRAP AASVEFVEAP LDELLEMLRI GKIDLVLARA RGKDDPTLVT ETLYSEPFVF
VSGPSHALAN GRSVTVKDLK EFMWLVPQQG SPSYIALAHL MELEGLNIDD SCVESSCIAL
NVELMARGPF VSILPLSHAT EYAARGRLSL MNTPSLTQLG EVVLYRRADL DSPAPLLLGE
CIREEAVSNL PGISSDLTG
|
|---|
| |