| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6404 |
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| Symbol | |
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| ID | 6277356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2668504 |
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| End bp | 2669583 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617446 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890089 |
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| Protein GI | 187921057 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGA AGTTGAGCGG TGCGGGATTG ATCTTGGCTT ATGCGGGCGT CGCACACGCC
CAATCCAATG TGACGTTATA TGGCGTTATC GACGACGGTC TGACGTATGT GTCCAACCAG
AGTGGTCACT CGGCCTGGCG GATGGACGAC AGCATCAGCC AGGGAGACCG CTTCGGCTTT
AAGGGAACAG AAGACCTTGG GGGTGGGCTT TCGGCACAGT TCAACCTTGA AAGCGGCTTC
AATCCGAACA CGGGTGCGTC TCGTCAAGGT GGTTTACTGT TCGGGCGCCA GGCGTGGGTC
GGTCTGTCCG ATTCTCGTTT CGGCACGCTG AAGTTCGGTC GGACGTACGA CCAGATGACG
CTCACTTTGA TTCAGTATCA CGTTGGCTAC TACGTCGGCA TCTACGCGTT CGACCAAGGC
GACGCCGACC GCATCTCAGG GGAATGGCTC AACAACCTCG TGACCTACGC CAGTCCGGTC
ATCGGCGGCT TCAAGTTCAG CGCTCAATAC AGCTTCAGTT CGCCGGGGGT GCCCTCGACT
TCGTTGGGAC CGGCCTACAG CCTTGGCGCG TCTTACGATC ATGGCCCCTT CTCCATTGGT
GCAGCCATGA CCAGCATTCA CGGATACTCC ATCAACCCTG GCGGGATGGG TATGCCTGTT
TTTCTTAACA CCAACACGGG ATTTGCTTCG ACAAGTGTGG TGGTAGACCG CTATCGCACA
GCCGGAATTG GCAGCTCCTA CACCTTCGGC AACCTCGGGA TCGCAGCTGT GTACGCGAAC
ACCCGCTTCC AGACGCTCGG ACACGCCAAC ACGCTCCAAA GCATCAACGC GAATATTCAC
TACTTCATCC TGCCGGCGGT GCAGGTGACC GGCGGGTACG GATATTCGCG CTTCACGACT
TACAACTGGA ACGAATTCAA TCTGGCGCTC GATTACCTAT TGTCCAAGCG GACCGACATT
ATCACGAGCG CGGACTACCA GAAGGCAAAT GGTGGCGCCC GTGCCGATCT CGTCACCCTG
CCAGTTTCCG GAGACAACAA GCAGCTCGTT CTTCGCATCG CGATGCGCCA TAAATTCTAG
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| Protein sequence | MRLKLSGAGL ILAYAGVAHA QSNVTLYGVI DDGLTYVSNQ SGHSAWRMDD SISQGDRFGF
KGTEDLGGGL SAQFNLESGF NPNTGASRQG GLLFGRQAWV GLSDSRFGTL KFGRTYDQMT
LTLIQYHVGY YVGIYAFDQG DADRISGEWL NNLVTYASPV IGGFKFSAQY SFSSPGVPST
SLGPAYSLGA SYDHGPFSIG AAMTSIHGYS INPGGMGMPV FLNTNTGFAS TSVVVDRYRT
AGIGSSYTFG NLGIAAVYAN TRFQTLGHAN TLQSINANIH YFILPAVQVT GGYGYSRFTT
YNWNEFNLAL DYLLSKRTDI ITSADYQKAN GGARADLVTL PVSGDNKQLV LRIAMRHKF
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