Gene Bphyt_6398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6398 
Symbol 
ID6278414 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2661422 
End bp2662196 
Gene Length775 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID642617441 
Producthypothetical protein 
Protein accessionYP_001890084 
Protein GI187921052 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG AACTGATAGA CGACGAATTG TGGTCATTCA TCGAACCACT GCTGCCTGCG 
CGAGCGCCAC GCAATCGCCA GTTTGCGGGC CGCAAACCGA CACCCGACCG AGCGGTGCTG
ACCGCTATCG TGTTCGTGTT GCGCTCAGGT ATTGCGTGGA ACCTTCTGCC GCAAGAAATG
GGATGTGGTT CAGGCACAGC TTGCTGGCGA CGGCTCGTCG CGTGGCAAGA GGCAGGTGTC
TGGCAACACA TTCACGAAAC GTTGCTCGCC GAACTGCGTC GCCGTGGCGA AATCAATTTC
TCGCGTGCGC TCGTCGACAG CTCATCGATT CATGCCGTGC TGGCGGGAAA AAATCGGCCC
GAATCCCACG GACCGGCGCA AGCTCGGCAG CAAACACCAC CTCATCGTCG ACGCGCAAGG
CATCCCGCTC GCGGTCATCC TGAGCGCGGC GAACCGGCAC GACATTACCC AGCTTGATGC
GCTCGTCGAT GCTATTCCAC ACATCCGGGG CAAGCGGGGC CGTCCCCCGC ACAAGCCGCA
AATCGTTCAG GGCGACCGGG GCTACAGTTC CGAATCCCAT CGGCGGCGCT TGCGCGAGCG
AGGCGTCACG CCAGCGCTCG CAAAAATCGG CTCGCCGCAT GGCAGTGGCC TCGGCATAAC
GCGTTGGCCA GTCGAGCGTT CGATTGCGTG GCTTCACTCG TTTCGACGGC TCAAGATTCG
TTACGAACGC TATGCGCATG TTCACGAAGT ATTCCGGTCT TTGGCTTGCG CCTAA
 
Protein sequence
MPKELIDDEL WSFIEPLLPA RAPRNRQFAG RKPTPDRAVL TAIVFVLRSG IAWNLLPQEM 
GCGSGTACWR RLVAWQEAGV WQHIHETLLA ELRRRGEINF SRALVDSSSI HAVLAGKKIG
PNPTDRRKLG SKHHLIVDAQ GIPLAVILSA ANRHDITQLD ALVDAIPHIR GKRGRPPHKP
QIVQGDRGYS SESHRRRLRE RGVTPALAKI GSPHGSGLGI TRWPVERSIA WLHSFRRLKI
RYERYAHVHE VFRSLACA