Gene Bphyt_6391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6391 
Symbol 
ID6279396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2653112 
End bp2653879 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID642617435 
ProductDNA-binding transcriptional regulator GlcC 
Protein accessionYP_001890078 
Protein GI187921046 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACAG CGGATCAGGA AAGCTCGCGG CAGGTGGCGG ACGTCGTCGC CGAACGCATC 
GAGCGCTTGA TTGTCGACGG CGTGCTGAAA ACGGGGCAGG CGCTGCCGTC CGAGCGGCGC
TTAACCGATA AGCTCGGCGT CTCGCGCACG GCGCTGCGCG AAGGGCTCAA GCTCTTGCGG
GCGCGCGGCA TCATCGAAAC CTCGCACGGC AAGGGTTCGT TTGTCGCGAG CCTGACCGCG
CAACCCACGC TCACGCCGAT GATGCATCTG CTCGGCTCGC AGCCGCGCAC GCTGTACGAT
CTGTTCGAAG TGCGCGGCTT GCTCGAGGCC GAGTCCGCGC GCCTTGCAGC GCTGCGCGGC
ACGCCCGCGG ACTTCGTGCT GATTACGCGA CGCTACGAGG AAATGCTCGC GGCGCATGGC
AAAGAGACCA GCACGTCTAC GCATGCGCGG CTCGATCATG CATTTCACCT CGCGATCTGC
GAGGCCTCGC ATAACCCGGT GCTGGTGCAT ACCTTAAGTA TGCTAACCGA CCTGCTATTG
AGTTCGGTGT TCGCGTCAGT GAACAATCTT TATCATCGCG AGCCGCAGAA GCGCGTGATC
GATCGCCAGC ATGCGCGACT CTATAACGCC GTGACCGGAA AACTGCCCGA GCAGGCACGC
AAGGCGGCTG CCAACCATAT CGACACCGTG TGCACGAATC TGCGGGAGAT CGAGCAGGAA
GAGCAGCGGC TCGTGCGTGC CACGTTGCGA CTGGAACGGT GGGAATGA
 
Protein sequence
MHTADQESSR QVADVVAERI ERLIVDGVLK TGQALPSERR LTDKLGVSRT ALREGLKLLR 
ARGIIETSHG KGSFVASLTA QPTLTPMMHL LGSQPRTLYD LFEVRGLLEA ESARLAALRG
TPADFVLITR RYEEMLAAHG KETSTSTHAR LDHAFHLAIC EASHNPVLVH TLSMLTDLLL
SSVFASVNNL YHREPQKRVI DRQHARLYNA VTGKLPEQAR KAAANHIDTV CTNLREIEQE
EQRLVRATLR LERWE