| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6382 |
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| Symbol | |
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| ID | 6278171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2641395 |
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| End bp | 2643185 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617426 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001890069 |
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| Protein GI | 187921037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAGC TGATTGAGGA TTATGCCCTG CTGGGCGACG GCGAGACCGC TGCGCTAGTG
GGTAAGGACG GTTCGATCGA CTGGTTATGC TGGCCGCGTT TTGACGACGA CGCATGTTTT
GCGGCGCTGC TCGGGACAAA CGACCACGGT CATTGGTCGC TTTCACCCGC CGGCGAAGTG
ACCGGCCAAA GCCGCCGCTA TCAGGAAGAT ACGCTGATCA TGGAAACAGA CTTCCAGACG
GCGGATGGCG AGGTGAGAAT CATAGATTTC ATGCCGGTGC GCAAGACTTT TTCGTCGCTT
GTACGTATCG TTGCCGGTTT GCGGGGAACC GTGAAGGTGC GCAGCACCTT ACGCCTGCGT
TTCGACTACG GCGCGTTGCC CCCATGGAGT GTTGCCGACG GCGACGACAT GATAGCGAAG
GTCGGCCCAA ATCTCGTTGC GTTGCGCTCG CCGCTAAGGC TGCACGTGAC TTCCGACTCG
ACCGTTGCAA ATTTCGACGT CTCGCAAGGA CAACGAATTG CTTTTGTCCT GAGTTACGCC
CGTTCGGAAG ACGGGCCACC AGAGCCTGTA GACGCAGAAG CAGCGCTCAT CTCGACCCAG
CATTTCTGGC GCGGCTGGAT TGGCCGTTTT GATAATTCGA AAACGGACTG GCCGTTTCAG
GTCCGGCGCT CCCTGATAAC ACTCAAGGCA TTGATTCACC GGCGCAGCGG TGGTCTGGTC
GCCGCGCCTA CCACGTCGCT TCCCGAAGCG CCTGGCGGCG AAATGAACTG GGACTATCGC
TACTGCTGGC TGCGCGATGC AAGTTTTACC CTCACAGCGT TACTGAATGC CGGCTACCAC
GAAGAAGCGG AGGGCTGGCG AAACTGGTTA CTTCGCGCCA TTGCAGGCTC GCCCGATAAC
ATGCGGATCA TGTATCGTGT TGACGGCGCA CGGCACCTGC CCGAGTGGAC CGTAGACACG
CTGCCTGGTT ACCGTTTTGC GAAACCTGTG CGAATCGGCA ATGCGGCATC GTCGCAGCAT
CAGCTCGATG TCTATGGAGA ACTGCTTGAC TGCCTCGATC TTGCCGGGAG GGGCGGGGTC
CCGTCGTCGG ACCAGGAATT CGCTATTGAA CAGAGGCTCG TCGAGCATCT CGAGACAATC
TGGCAGACGG TCGGCTCGGG AGTGTGGGAG TCGCGAGCGG AGCCACGCCA TTACACTTAT
TCGAAAGTCA TGGTATGGGT TGCATTCGAC CGCTTCGTGA GTCGCCACTC GAGGAGCAAT
CTCGTTAGTC GTGAAGTGCT GGACCGGATC ACAGCGCTGC GGCAGACGTT GCACGACGAG
ATCTGCCGTG AAGGCTGGAA TGAGGGTCTC GGCACGTTCA CGCAACACTA CGGTTCTCAG
GCGCTGGACG CCAGTCTTCT TCTGCTGCCA CTCGTCGGCT TTCTTCCCGT CGGCGATCCC
CGGATGGACT CGACGATTGC AACGATTGAA CGCGAGCTCT CGGAGGGAGG GCTGATTCGA
CGCGAGAAGC CCAACGCAGA TGGACCAAAA GAGGGCGCGT TCCTGGCTTG CTCGGGCTGG
ATGGCGGAAT GCATGAAGCT TCAGGGCCGC GACAGGGAGG CGCGGGAGCA GTTCGAGCGT
CTGCTCGCAG CCGCCAACGA TGTGGGCCTG CTGGCAGAAG AGTACAACGT GCCCGGCGGT
CATCTGGCTG GAAATTTTCC GCAAGCCTTG ACCCACCTCG CCATTGTGAA CGCCGCACTC
GCTCTCAGTG GCCCCACGTT GCAGCGCGGT GGCCGGTCCT GCGGCTTTTG A
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| Protein sequence | MSKLIEDYAL LGDGETAALV GKDGSIDWLC WPRFDDDACF AALLGTNDHG HWSLSPAGEV
TGQSRRYQED TLIMETDFQT ADGEVRIIDF MPVRKTFSSL VRIVAGLRGT VKVRSTLRLR
FDYGALPPWS VADGDDMIAK VGPNLVALRS PLRLHVTSDS TVANFDVSQG QRIAFVLSYA
RSEDGPPEPV DAEAALISTQ HFWRGWIGRF DNSKTDWPFQ VRRSLITLKA LIHRRSGGLV
AAPTTSLPEA PGGEMNWDYR YCWLRDASFT LTALLNAGYH EEAEGWRNWL LRAIAGSPDN
MRIMYRVDGA RHLPEWTVDT LPGYRFAKPV RIGNAASSQH QLDVYGELLD CLDLAGRGGV
PSSDQEFAIE QRLVEHLETI WQTVGSGVWE SRAEPRHYTY SKVMVWVAFD RFVSRHSRSN
LVSREVLDRI TALRQTLHDE ICREGWNEGL GTFTQHYGSQ ALDASLLLLP LVGFLPVGDP
RMDSTIATIE RELSEGGLIR REKPNADGPK EGAFLACSGW MAECMKLQGR DREAREQFER
LLAAANDVGL LAEEYNVPGG HLAGNFPQAL THLAIVNAAL ALSGPTLQRG GRSCGF
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