Gene Bphyt_6367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6367 
Symbol 
ID6278456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2629423 
End bp2630748 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content58% 
IMG OID642617415 
ProductChloride channel core 
Protein accessionYP_001890058 
Protein GI187921026 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGC GCTCTCTTAT TGACAGACAA ACTCTCCAGC GGGCGCACCG CTTGTGGCTT 
CACTACGGTG TTTTCTGGCT CGGTGCAGTG GCAGTCGGGC TTGTTGCGGT CGCGTACGCA
CGACTCATTG ACTTTGGCTA CAGCGAATTT CTCCAGTACG TCGCCCGATA TCGGTGGCTA
CCGCTACTGG TCACACCTGC TATAAGCGCG ATTTGCGTCT GGCTGACGCT ACGTTTCTTC
CCCGGTTCCG AAGGTAGTGG TATTCCGCAA GTCATTGCAA CCTTGCACGA CCGCGGTGGG
ATTGGAGAGC GTCTTCTGAC GCCTGGGATC CTCCTCGGCA AGATACTCGT CTCGTTTCTC
GCCATGCTCG GCGGATTTAC CATCGGACGC GAGGGGCCGA CGATTCATGT TGGTGCGGCG
TTGATGTTCA ATCTGCGGTC GTTTTATCCG AAGCGGTTTC GTGCGATGCG AGGCGGTGCA
CTGGAGCGCA GACTGGCGCT AGCCGGCGCC GCTGCAGGCC TCTCAGCCGC ATTCAATGCA
CCGCTGGCGG GTGTGGTCTT TGCCATTGAG GAGTTGACCC GCAGTTTCGA GCAGCGCACG
AGTGGCGTGC TTATCACTGC AATCATCTTT GCCGGTATCG TTTCGCTCGG CATCCAGGGA
AACTATACCT ATTTCGGAAC GATCGACATC GGAACGGGTT TTCCCGATCT GCTGGCTGTC
GCAGTCGTCC TCATTGGCGT CGTTGCCGGA AGCGCCGGCG GCATCTTCTG CTGGCTGCTT
CTGAATACCC GTCGATGGAT GCCATCCATC ATCCTGGACT GCCGCTCCCA TCGCCCGATT
CTGTTCGGTG CCGGCTGCGG GCTGGTCATC GCCGCGATCG GCGTGTTCTC CGGTGGCCAC
ACTTTTGGAA GCGGCTACGT CGAAGCAAGG GACATGCTTG ACGGACGCGC TCATCTGACG
ATCCTTTATC CGGTACTCAA GATGGCCTCG ATGATCGGAT CGTATCTCCC CGGCGCGCCA
GGAGGGCTTT TTGCACCGTC CCTCGCGATC GGTGCAGGCA TCGGCAATGC GCTCCACCTC
GTGTTCTCCC AGATGCAATT GCCGATGCTG ATTGCGCTCG GCATGGTCGG CTATCTTGCT
GCCGTCACGC AAAGTCCGAT TACATCATTT GTCATTGTGA TCGAGATGAT CAACGGACAT
GCCCTTGTGA TTTCTCTGAT GGCGACCGCG TTGATAGCAA GCCAGGTTTC GCGGCTATTT
GCGCCGCCGT TATATGAGGC GTTGTCTGAG CGCTACAGCA GCGGTGGCGC AAAGCAGGCC
TCATAA
 
Protein sequence
MRLRSLIDRQ TLQRAHRLWL HYGVFWLGAV AVGLVAVAYA RLIDFGYSEF LQYVARYRWL 
PLLVTPAISA ICVWLTLRFF PGSEGSGIPQ VIATLHDRGG IGERLLTPGI LLGKILVSFL
AMLGGFTIGR EGPTIHVGAA LMFNLRSFYP KRFRAMRGGA LERRLALAGA AAGLSAAFNA
PLAGVVFAIE ELTRSFEQRT SGVLITAIIF AGIVSLGIQG NYTYFGTIDI GTGFPDLLAV
AVVLIGVVAG SAGGIFCWLL LNTRRWMPSI ILDCRSHRPI LFGAGCGLVI AAIGVFSGGH
TFGSGYVEAR DMLDGRAHLT ILYPVLKMAS MIGSYLPGAP GGLFAPSLAI GAGIGNALHL
VFSQMQLPML IALGMVGYLA AVTQSPITSF VIVIEMINGH ALVISLMATA LIASQVSRLF
APPLYEALSE RYSSGGAKQA S