| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6363 |
|---|
| Symbol | |
|---|
| ID | 6279837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2625351 |
|---|
| End bp | 2626265 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642617412 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001890055 |
|---|
| Protein GI | 187921023 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.284625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA TGACCGACTT CGATCTGCGC TTGCTGCGCA TCTTCAAAAC AGTCACAGAT
TGCGGCGGAC TTTCCGCAGC TGAATCCGCG CTGAACATGA ATCTCTCGAC CATCAGCACG
CACATTGCAG ATCTTGAATC ACGTGTGGGC ATCAGGTTAT GCGAACGCGG CCGGCGCGGA
TTTCGACTGA CTGTCGAGGG TAGCTCTCTA TACCAGGCTA CCGAAAAGCT ATTGGATTCG
GTTGAAGAAT TTCGCGCAGG ACTCGGCGCG CTGCGCCACC AACTCAGCGG GGAACTGACG
ATAGGAATTG TAGACAACAC GATCACCGAC CAGCACTCGC ATATCGCCAC CGCAATTCGC
GCGGTCAAAC AACGGAGCGG TGACCTGCAC ATCAAACTGG AAATCAAATC ACCAGTGGAA
ATTGAGGAGG CCATACAGGA ACGCAGACTG CATGTCGGCA TCGGGCCTTT TCGTAACGTC
TCTCCCGGCT TGACCTATGA GCCGCTCTAC ACCGAAGAAC TGCATCTTTA CTGCGGAAAA
GAACATCCGA TCTTCGCATC AGCTCCGATG GATGTCGAGA TGGATAACCT CCGCGAACTG
GACTATGTGG CGCGCGGGTA TATGCGGGAG GCGAAAGAAT GGATCGATGC TTCCAGGATC
AAAGTCGCAG CTACCGTTTA TCACATGGAG GCTGTCGCAG TTCTCGTGCT ATCTGGGAAG
TTCGTTGGCT ACCTTCCTAC CCACTACGCC GCGCAGTGGG TCCAACAGCA ATTGATGCGT
CCGCTGCGCC CCGATGTTCT GAGTCACCAT GCCGCCTTTA GTCTTGTGAC CCGAAAAGAT
CGCGAACCGA CGCTCGCGGT GCAGGTATTT GTCGAGGCCT TGCGGGCCGA TCTGTCGGCC
CGCATAACCA GTTAG
|
|---|
| Protein sequence | MIKMTDFDLR LLRIFKTVTD CGGLSAAESA LNMNLSTIST HIADLESRVG IRLCERGRRG
FRLTVEGSSL YQATEKLLDS VEEFRAGLGA LRHQLSGELT IGIVDNTITD QHSHIATAIR
AVKQRSGDLH IKLEIKSPVE IEEAIQERRL HVGIGPFRNV SPGLTYEPLY TEELHLYCGK
EHPIFASAPM DVEMDNLREL DYVARGYMRE AKEWIDASRI KVAATVYHME AVAVLVLSGK
FVGYLPTHYA AQWVQQQLMR PLRPDVLSHH AAFSLVTRKD REPTLAVQVF VEALRADLSA
RITS
|
|---|
| |