Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6350 |
Symbol | |
ID | 6278377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2612457 |
End bp | 2613281 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617402 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001890045 |
Protein GI | 187921013 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTGGA GCAGCTTGTT GAAAACCATC GTCTTTCTGG ACCGCGCGAC GCTGTCGGGC GATGTGCTCG ATCAGCTGCC GCATCTGGAA CTGATCGGCG TGCCCGCCGC AGGCGTCAAT CATCTGGATA CCGAAACATG TCGCAAACGG GGCATTGGCA TCGTCGCGTG TCCGGGCTAT TCGACGATTT CCGTGCCCGA ACACGCGTTC GCGTTGATGC TCGCGCTCCG CCGCAACCTT ATGCCTTACT GGCACGACGT CTATGCTGGC GGCTGGAGCG GATCGCCCAC CTTTTACGCC GAACTGCATC CGATCCAGGA TCTGCACGGA TCGACGCTCG GTATCGTCGG TGCCGGTCAC GGTGGAAAGC GTCTCGCCGA ACTGGCCCGT GCGTTCGGCA TGCGGGTACT GTTCGCGGAG CGCAAGCGCG CGAGTTGCGT GCGCGACGGC TATGTGGCAT TTGACGAGGT GCTGCGTGAG GCCGATACGA TCAGCCTGCA TTGCCCGCTT ACCGACGAAA CGCGGCATTT GTTCGGTCTC GCCGAATTTG AGCGAATGAA GCGCAGCGCG TCACTCGTGA ACGCCGCGCG CGGCGGTATC GTCGACGAGG GAGCGCTGAT CGAGGCACTC GACCGCAAGC TGATCGCGAA TGCCGCGCTC GACGTCCTCG AGCAGGAGCC GCCCGCGGCC GATCATCCGC TGCTATCCAG AGCGCGCACC GATCTGATCG TGACGCCGCA TGTTGCGTGG CGAACCCAGG TGGCCATGAA GCGGCTCGTC ACGCAACTCG CACGAGGCAT CGCAGAGCAT TACGCGCAGC ATTGA
|
Protein sequence | MKWSSLLKTI VFLDRATLSG DVLDQLPHLE LIGVPAAGVN HLDTETCRKR GIGIVACPGY STISVPEHAF ALMLALRRNL MPYWHDVYAG GWSGSPTFYA ELHPIQDLHG STLGIVGAGH GGKRLAELAR AFGMRVLFAE RKRASCVRDG YVAFDEVLRE ADTISLHCPL TDETRHLFGL AEFERMKRSA SLVNAARGGI VDEGALIEAL DRKLIANAAL DVLEQEPPAA DHPLLSRART DLIVTPHVAW RTQVAMKRLV TQLARGIAEH YAQH
|
| |