Gene Bphyt_6350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6350 
Symbol 
ID6278377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2612457 
End bp2613281 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID642617402 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001890045 
Protein GI187921013 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGA GCAGCTTGTT GAAAACCATC GTCTTTCTGG ACCGCGCGAC GCTGTCGGGC 
GATGTGCTCG ATCAGCTGCC GCATCTGGAA CTGATCGGCG TGCCCGCCGC AGGCGTCAAT
CATCTGGATA CCGAAACATG TCGCAAACGG GGCATTGGCA TCGTCGCGTG TCCGGGCTAT
TCGACGATTT CCGTGCCCGA ACACGCGTTC GCGTTGATGC TCGCGCTCCG CCGCAACCTT
ATGCCTTACT GGCACGACGT CTATGCTGGC GGCTGGAGCG GATCGCCCAC CTTTTACGCC
GAACTGCATC CGATCCAGGA TCTGCACGGA TCGACGCTCG GTATCGTCGG TGCCGGTCAC
GGTGGAAAGC GTCTCGCCGA ACTGGCCCGT GCGTTCGGCA TGCGGGTACT GTTCGCGGAG
CGCAAGCGCG CGAGTTGCGT GCGCGACGGC TATGTGGCAT TTGACGAGGT GCTGCGTGAG
GCCGATACGA TCAGCCTGCA TTGCCCGCTT ACCGACGAAA CGCGGCATTT GTTCGGTCTC
GCCGAATTTG AGCGAATGAA GCGCAGCGCG TCACTCGTGA ACGCCGCGCG CGGCGGTATC
GTCGACGAGG GAGCGCTGAT CGAGGCACTC GACCGCAAGC TGATCGCGAA TGCCGCGCTC
GACGTCCTCG AGCAGGAGCC GCCCGCGGCC GATCATCCGC TGCTATCCAG AGCGCGCACC
GATCTGATCG TGACGCCGCA TGTTGCGTGG CGAACCCAGG TGGCCATGAA GCGGCTCGTC
ACGCAACTCG CACGAGGCAT CGCAGAGCAT TACGCGCAGC ATTGA
 
Protein sequence
MKWSSLLKTI VFLDRATLSG DVLDQLPHLE LIGVPAAGVN HLDTETCRKR GIGIVACPGY 
STISVPEHAF ALMLALRRNL MPYWHDVYAG GWSGSPTFYA ELHPIQDLHG STLGIVGAGH
GGKRLAELAR AFGMRVLFAE RKRASCVRDG YVAFDEVLRE ADTISLHCPL TDETRHLFGL
AEFERMKRSA SLVNAARGGI VDEGALIEAL DRKLIANAAL DVLEQEPPAA DHPLLSRART
DLIVTPHVAW RTQVAMKRLV TQLARGIAEH YAQH