Gene Bphyt_6341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6341 
Symbol 
ID6279325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2604692 
End bp2605393 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID642617395 
ProductABC transporter related 
Protein accessionYP_001890038 
Protein GI187921006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.879004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC TGAACAACGT TTCGAAGTGG TATGGCGGCA ATCGCGTATT GAACGACTGC 
ACGGCGAGCA TTGCGCGCGG TGAAGTCGTC GTGATCTGCG GGCCGTCCGG GTCCGGCAAG
TCCACCCTCA TCAAATCCGT CAACGGGCTG GAAGCGGTGC AGAGCGGACA GATCGTGGTG
GACGGCATCG ACGTGACGGC AAAGCGCGCG GATCTTTCGC GGCTACGGGC GCGCGTCGGC
ATGGTGTTTC AGCATTTCGA ACTCTTTCCT CATCTGTCGG TGCAGCGCAA CCTGATGCTC
GCGCAAATGA ACGTGCTCGG CCGCGCGCGC GACAAAGCCG CGGAGCGTGC ACGCTTGCTA
TTGCTCCGCG TAGGCTTGAG CGGTCACGAG CACAAGTATC CGGCGCAATT GTCGGGCGGG
CAGCAGCAGC GTGTGGCGAT TGCGCGGGCG CTTTCGATGG ACCCCGTCGC CATGCTGTTC
GATGAGCCGA CTTCCGCGCT CGATCCCGAG ATGGTCAACG AAGTGCTCGA TGTGATGACG
ATGCTGTGCG TCACGCACGA GATGGGTTTC GCGAAGCGCG TGGCCGACCG CGTGTTGTTC
ATGGATCGCG GCGTCATCGT GGAAGACGAT ACGCGCGAAG CCTTCTTCGA GCGTCCGCGC
TCCGAACGCG CGCGAGACTT TCTTTCGCGC ATCCTGCATT GA
 
Protein sequence
MIELNNVSKW YGGNRVLNDC TASIARGEVV VICGPSGSGK STLIKSVNGL EAVQSGQIVV 
DGIDVTAKRA DLSRLRARVG MVFQHFELFP HLSVQRNLML AQMNVLGRAR DKAAERARLL
LLRVGLSGHE HKYPAQLSGG QQQRVAIARA LSMDPVAMLF DEPTSALDPE MVNEVLDVMT
MLCVTHEMGF AKRVADRVLF MDRGVIVEDD TREAFFERPR SERARDFLSR ILH