Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6341 |
Symbol | |
ID | 6279325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2604692 |
End bp | 2605393 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642617395 |
Product | ABC transporter related |
Protein accession | YP_001890038 |
Protein GI | 187921006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.879004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC TGAACAACGT TTCGAAGTGG TATGGCGGCA ATCGCGTATT GAACGACTGC ACGGCGAGCA TTGCGCGCGG TGAAGTCGTC GTGATCTGCG GGCCGTCCGG GTCCGGCAAG TCCACCCTCA TCAAATCCGT CAACGGGCTG GAAGCGGTGC AGAGCGGACA GATCGTGGTG GACGGCATCG ACGTGACGGC AAAGCGCGCG GATCTTTCGC GGCTACGGGC GCGCGTCGGC ATGGTGTTTC AGCATTTCGA ACTCTTTCCT CATCTGTCGG TGCAGCGCAA CCTGATGCTC GCGCAAATGA ACGTGCTCGG CCGCGCGCGC GACAAAGCCG CGGAGCGTGC ACGCTTGCTA TTGCTCCGCG TAGGCTTGAG CGGTCACGAG CACAAGTATC CGGCGCAATT GTCGGGCGGG CAGCAGCAGC GTGTGGCGAT TGCGCGGGCG CTTTCGATGG ACCCCGTCGC CATGCTGTTC GATGAGCCGA CTTCCGCGCT CGATCCCGAG ATGGTCAACG AAGTGCTCGA TGTGATGACG ATGCTGTGCG TCACGCACGA GATGGGTTTC GCGAAGCGCG TGGCCGACCG CGTGTTGTTC ATGGATCGCG GCGTCATCGT GGAAGACGAT ACGCGCGAAG CCTTCTTCGA GCGTCCGCGC TCCGAACGCG CGCGAGACTT TCTTTCGCGC ATCCTGCATT GA
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Protein sequence | MIELNNVSKW YGGNRVLNDC TASIARGEVV VICGPSGSGK STLIKSVNGL EAVQSGQIVV DGIDVTAKRA DLSRLRARVG MVFQHFELFP HLSVQRNLML AQMNVLGRAR DKAAERARLL LLRVGLSGHE HKYPAQLSGG QQQRVAIARA LSMDPVAMLF DEPTSALDPE MVNEVLDVMT MLCVTHEMGF AKRVADRVLF MDRGVIVEDD TREAFFERPR SERARDFLSR ILH
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