| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6335 |
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| Symbol | |
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| ID | 6277654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2596740 |
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| End bp | 2598488 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642617389 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_001890032 |
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| Protein GI | 187921000 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAC GCGCCCGACT AAACGTATCG AAAACGGTGG TCAAATCGCT GGAAGCCGCG
AACATCGACC ACGTGTTCCT GGTGCCGGGG AAGATGATCT ATCCCCTGCT GGATGCGATC
GACAAGTCGC CGTCGATCCG CGGAATTGTT TGCGCACATG AGACCAGCAG TGCGTTCATG
GCTGACGGCT ATGCGCGGGC CAGCCGTAGA TTTGGTGTCT GCGTTGGCAT TTCCGGACCA
GGCACCATGA ATTTCGTGCC CGGTATGGCG TCCGCTCATG CAGACCGGAT TCCCGTGCTG
TACATTGCCG GCGGTGTCTC GTCGCGCGCG GAAGGAAAAG GTGCATTCCA GGACGCTACG
CTGAGCGGCA TTTTCGAAAG CGGCGTGGTG AAGAGTCTGG TAGAGAATGT GGTCGAGTTG
AAGAACAAGG ACAATCTTCA AGCCGAAATG CGTCGCGCCA TGGACGGGCT GGACTGGATG
CGTCGCGCGC AATCTTTCAT CAGCATTCCT GTCGACGTCC AGCAGCACGA CGCTTTGCCC
GGTCAGGAAG GCTCGCGACA ACCGTACGAT CATGGCGAGT TCAATACATC CGGAGTCCCC
GCGAACCATG CAGCATTGCA GGCTTTATGC GACCGGTTTT TACTCACATC GAAGCGCGTC
GCGTTTCTGA TCGGCAGTCG CGGCAATGAC CCGGAAACCG CAAAGGCCTT ACTCGATGTG
GCCGAGAAAT TTTGCATTCC TGTAGCGACT ACGCTTTCTG GGAAAGGGGC GTTTCCTGAG
GATCATGTAC TTTCGCTCGG CGTGTACGGA TTCGCAGGCC ACTCGCGAGC CGTTCGCGTC
ATCAACTCGG ACGAACTCGA TGTCCTCGTC GTATTCGGCA GCGATCTGAA CCAGCGCGAC
AGCATGAACT GGACGGAGAA GCTGACTGCC TGGAAAGAGT TGATCGTCTT CGACGACAGT
TTCGATGCGC CCGCCATGGG CCATGTTGCG CGTAGCCGTG TGTTTTCCGG AATTCGTGCC
TCATTTCGCC TGCTTTCAAA GATGGACGCT AACCGGCGCG CCGACTTTCA CGCGGTTCTG
GAACGAAGAA GAGCATGGGC CGTTGAGGTC AACCGGATTC CTCTGTACGA CGATAAGTTC
GAGCATCCCG GCGCGCGGGA CCCAAATGGC GACGAATCGC TCTATACAGG GGACGTCGTC
AAGCAACTGT GCGAACTCTT GCCGAAGGAC GCAAACGTCG TGGTCGATTC CGGCGCCCAT
CGGATATTCA TGGCTCACTA CTGGCTTTCG TCGGGCATCG GCAACTACTT TTCCTCCAGT
TCTCTCGCGC CGATGGGTTG GGCGATCGCG GCCGGGATCG GTATCAAGCT TGCCGCCCCG
CAACGGCCAT GTGTTGTCGT GACTGGAGAC GGGTGCATGC TGATGCACGG AATGGAGATC
CAGACCGCGG CCCGATATAA CATCAAGATG CTTTACATCG TGTTAAATAA TTCGGCACAT
GGCGCGGTCC ATATCGATGC GATCAGCAAG GGCTCCGTTC CGGAACGGTT CACCAGGCTG
CCGAGCCACA ACTGGGCTGC GTTTGCGACT TCGCTCGCAG TCGCGGCGCG CAGGGTCGAG
CGCCTTCAGG ATCTGGCTGA CGCGCTAAGC GAGGCGTCCC GATTTGATGG TCCGTTCCTG
ATTGAAGTAA TGACCGGCGT ATTCCCCGCA CCGAACCGGT ACTACGCCGA ATGTGCGGCT
CATCCCTGA
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| Protein sequence | MESRARLNVS KTVVKSLEAA NIDHVFLVPG KMIYPLLDAI DKSPSIRGIV CAHETSSAFM
ADGYARASRR FGVCVGISGP GTMNFVPGMA SAHADRIPVL YIAGGVSSRA EGKGAFQDAT
LSGIFESGVV KSLVENVVEL KNKDNLQAEM RRAMDGLDWM RRAQSFISIP VDVQQHDALP
GQEGSRQPYD HGEFNTSGVP ANHAALQALC DRFLLTSKRV AFLIGSRGND PETAKALLDV
AEKFCIPVAT TLSGKGAFPE DHVLSLGVYG FAGHSRAVRV INSDELDVLV VFGSDLNQRD
SMNWTEKLTA WKELIVFDDS FDAPAMGHVA RSRVFSGIRA SFRLLSKMDA NRRADFHAVL
ERRRAWAVEV NRIPLYDDKF EHPGARDPNG DESLYTGDVV KQLCELLPKD ANVVVDSGAH
RIFMAHYWLS SGIGNYFSSS SLAPMGWAIA AGIGIKLAAP QRPCVVVTGD GCMLMHGMEI
QTAARYNIKM LYIVLNNSAH GAVHIDAISK GSVPERFTRL PSHNWAAFAT SLAVAARRVE
RLQDLADALS EASRFDGPFL IEVMTGVFPA PNRYYAECAA HP
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