| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6331 |
|---|
| Symbol | |
|---|
| ID | 6277333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2593776 |
|---|
| End bp | 2594693 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642617385 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_001890028 |
|---|
| Protein GI | 187920996 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.685362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CGTTGGCCGA AGTCGTGACG TTGCTGCAGC CGGGCGCGCG CTTTTCCAAG
CTGGTTCTGG GTACAGGCTC ATGGCGCGTT CGCCACTCCG ACAGCGGGCG GGCGTTCTAC
TACGTGATCC TTGAGGGCGC ATGCCGCATG GCGATCGAGG GAAACGAGCC CATCGAGCTT
GTCTCGGGTG ACTTCGTGCT GATTCCCGCC GCCTACGGCG TGTCGATGTC CAGCCTCGTG
CCACCACCGC CCGGCGTTGA AACGCTCGCG CCGCGCGCGC TTGGCAACAA TGAATTCGGC
ATCGGCGATC CGGATGGTCC GATCGATTTG CGCATGATGG TCGGCCACTG CAGCTTCGGT
TCACCCGATG CATCGCTGCT GGTCTCTTTG CTACCGCAAA TCGTGCATGT CCGCGGCGTC
GATCGACTGG CTACCCTCGT GCAACTCGTA CGGGACGAAT CGCGCGCGCA GCGGCCAGCG
CGTGAGGTCG TGCTGTCACG ACTGCTGGAA GTGCTGCTTA TCGAGGCGCT ACGGTCGACG
GCGGAAACGA CAGCATCACC CGGGCTGGTT CGTGGACTGT CCGATGCCCG CCTTGCGGCC
GCGATCCGCG TCATGCACGA ACACCCTACA CGCGCGTGGA CAGTTGCTGA CCTCGCGAAA
GAGGCCGCCC TCTCGCGCTC GACCTTCTTT GAGCGCTTCA ACCGCGCGGT TGGCGTGGCG
CCCATGGAAT ATTTGCTCAC CTGGCGCATG GCGCTCGCGA AGAACCTGCT ACGTCGTAAT
GAAGGCCGTG TCGCCGAAGT GGCACAGCGC GTTGGCTACA GCTCCGCCAG CACCTTCAGC
GTCGCTTTCA CGCGGCACGT CGGGCGGCCA CCTTCTCAAT ACGCGCGCGA GGAGCAGCTG
ACCACTGACG ACACGTGA
|
|---|
| Protein sequence | MIDPLAEVVT LLQPGARFSK LVLGTGSWRV RHSDSGRAFY YVILEGACRM AIEGNEPIEL
VSGDFVLIPA AYGVSMSSLV PPPPGVETLA PRALGNNEFG IGDPDGPIDL RMMVGHCSFG
SPDASLLVSL LPQIVHVRGV DRLATLVQLV RDESRAQRPA REVVLSRLLE VLLIEALRST
AETTASPGLV RGLSDARLAA AIRVMHEHPT RAWTVADLAK EAALSRSTFF ERFNRAVGVA
PMEYLLTWRM ALAKNLLRRN EGRVAEVAQR VGYSSASTFS VAFTRHVGRP PSQYAREEQL
TTDDT
|
|---|
| |