| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6312 |
|---|
| Symbol | |
|---|
| ID | 6278494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2577670 |
|---|
| End bp | 2578515 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642617367 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001890010 |
|---|
| Protein GI | 187920978 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACA AAACGATCGT TGTCCACCTC GACACCAGCC CGAACGCCCA TCCGCGGCTC
GAAATCGGGC TGCGTCTGGC CAAACAGTTC GGCGCACATC TGACCGGCGC CTTCGCCGTC
TTCAGCCCGG ACCCTCGCTC GCTCTATGTC ATGGCCGGGA CTGCGGAGTA TTACCGGCAG
CATGAAGAGA CGCGCACGGA GCGGCGCGCG GCGCTCGAAC GGCTGTTTCA CGCCGAACTG
CGGCGCGCCG ACGTGCCGGG CGAATGGGTG GCCATCGACG AGCCCGCCAG TCTCGCTGTG
CCGCGTGCGG GCCGCTGCGC CGACCTTATC GTGGCAGGCC AGGACAATCC GGAGGATCCG
GAGGATCCGG AATCGTATGT CGGCGACTTC TTTCCGGAAA ACCTCATTCT GTCGTGCGGC
CGCCCGGTGT TGCTTGTGCC TTACGCAAGC AATGCAAGGT CGACGGGCGG GCGGGTCCTG
GTCGCGTGGG ACGGCAGCCG CGAAGCCACG CGCGCCGTGC ACGACGCGCT GCCGTTTATG
CGCACGGCGA GCAGCACGAC GATTCTTACT GTCAACGGGA TGCACGAATT CGAGCCCGCC
CGAATCCCCG GCGCGGACAT TGCCACCGTG CTGGCACGGC ATGGCGTGCA GGTGGAAATC
GTCGACATCG AAACCGGACC GGGCGGCTCG GTCGGCGAGT TGCTGCTGTC ACAGGTGGCC
GACAGCGGCG CCGATCTGCT GGTGATGGGC GCCTACGGCC ACGCCCGCTG GCGCGAGCTG
GTGATGGGCG GCGCCACGCG CACGATTCTC CGCTCGATGA CGGTGCCCGT GCTGATGTCG
CACTGA
|
|---|
| Protein sequence | MSYKTIVVHL DTSPNAHPRL EIGLRLAKQF GAHLTGAFAV FSPDPRSLYV MAGTAEYYRQ
HEETRTERRA ALERLFHAEL RRADVPGEWV AIDEPASLAV PRAGRCADLI VAGQDNPEDP
EDPESYVGDF FPENLILSCG RPVLLVPYAS NARSTGGRVL VAWDGSREAT RAVHDALPFM
RTASSTTILT VNGMHEFEPA RIPGADIATV LARHGVQVEI VDIETGPGGS VGELLLSQVA
DSGADLLVMG AYGHARWREL VMGGATRTIL RSMTVPVLMS H
|
|---|
| |