| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6307 |
|---|
| Symbol | |
|---|
| ID | 6278586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2571438 |
|---|
| End bp | 2572127 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642617362 |
|---|
| Product | putative signal transduction protein with CBS domains |
|---|
| Protein accession | YP_001890005 |
|---|
| Protein GI | 187920973 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAT CCGATGTCAT GACCAGCAAC GTTATATCCG TGACACCTGA AATGACCGTG
CGAGAGGTCG CCAGAATTTT TGTCGACAAC GGCATTAGCG GCGCGCCGGT TCTGGATCGC
GACGGCCACG TCGCCGGCAT GATCAGCGAA GGCGATCTGT TCCGCCGTGC CGAAATCGGC
ACCGACGAGC GCACGCGAAC CTCGTGGCTC GATTTCTGGT CCGCGAGCGA GGAGGCACGG
GATTACATCA AAACCCACGC GCTGAAAGTT CGCGATGTAA TGACCACCGA CGTGGTGACC
GTTCAGCCCG AAACGCAACT CGGTGAAGTG GCCGGCATCC TCGAAACCCG GCGCATTAAA
CGTGTGCCCG TGACGGACGC GGGGCGGCTC GTGGGCATCG TAAGCCGGGC CAATCTCGTC
CAGGCGCTGG CGAGCGTACC GGATGAGCCG GCATCGGATG TGACGCTATC CGACGGCGAA
ATCCGCGCAA TGTTGATGGG CGAACTCGCG GGTCGCAAAT GGAGCTTCGC CGGACGCAAT
ATCGTCGTCA CGGATGGAGT CGTGCATCTG TGGGGCATCT TCCATTCGTT GGAAGCGGTC
GAGGCGGTCC GCGTGGCGGC GCAAACCATA CCCGGTGTCA AGCGCGTGGA GGATCACACC
GAGCCTTATC CGGTCATGCC GGGCATCTAG
|
|---|
| Protein sequence | MRASDVMTSN VISVTPEMTV REVARIFVDN GISGAPVLDR DGHVAGMISE GDLFRRAEIG
TDERTRTSWL DFWSASEEAR DYIKTHALKV RDVMTTDVVT VQPETQLGEV AGILETRRIK
RVPVTDAGRL VGIVSRANLV QALASVPDEP ASDVTLSDGE IRAMLMGELA GRKWSFAGRN
IVVTDGVVHL WGIFHSLEAV EAVRVAAQTI PGVKRVEDHT EPYPVMPGI
|
|---|
| |