| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6305 |
|---|
| Symbol | |
|---|
| ID | 6279984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2569723 |
|---|
| End bp | 2570505 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642617360 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001890003 |
|---|
| Protein GI | 187920971 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG TCGACGCCCT GACGGTCCGC TTCAAGACAA AGACCGGTTA CTTCGAGGCC
GTGCGCGAGG CGAGCTTTCA CGTCGGCGAA GGAGAAGTTT TCGGGCTGGT CGGCGAATCC
GGATCCGGCA AGTCGACGAT CCTGCGCGCG CTGACCGGCC TCGCGCCCAT CGCTGGCGGC
ACTATGACGA TCGGCTCGCA CGTGCCTGGA GAAAAGATCA ACCGCTCGTT TCGGCGCGAC
GTGCAGATGG TCTTTCAGGA TCCGTACGGC GCACTGCATC CGCGTTTCAC AGTGGATCAG
ACCTTGCGCG AACCGCTGAG CATCAACGGC ATCGACCGGC AGGACAAACG CATTGTCGAC
GCGCTGAACG AAGTCGGGTT GGGTCCGGCG TATCGCTTTC GCTATCCGCA TCAGTTGTCG
GGGGGCCAGC GGCAGCGCGT CTCGATCGCA CGGGCGCTGA TTGTCGAACC GCGCGTGCTG
CTGCTCGATG AGCCGACGTC CGCGCTCGAT GTGTCCGTGC AGGCCGAGAT TCTCAACCTG
CTGCGGCGGC TTCATCGTGA ACGCAACCTG ACGATGATCC TCGTGAGCCA CAATCTGGCG
GTGGTCGGCT TTCTCTGCTC GCGCGTCGCG GTCATGCGTA ATGGCGAGAT CGTCGAGCAG
TGCGATATCG CGTCCATTCG CGCGCAACAG GTCGAGCATG AGTACACGCG CCGCCTGCTG
CTCGCGACTA CGGGCTATCA GCGCGAGCCG GTTCAGGCGA TCGGAGTGGA CGCAGCGTTG
TAA
|
|---|
| Protein sequence | MIDVDALTVR FKTKTGYFEA VREASFHVGE GEVFGLVGES GSGKSTILRA LTGLAPIAGG
TMTIGSHVPG EKINRSFRRD VQMVFQDPYG ALHPRFTVDQ TLREPLSING IDRQDKRIVD
ALNEVGLGPA YRFRYPHQLS GGQRQRVSIA RALIVEPRVL LLDEPTSALD VSVQAEILNL
LRRLHRERNL TMILVSHNLA VVGFLCSRVA VMRNGEIVEQ CDIASIRAQQ VEHEYTRRLL
LATTGYQREP VQAIGVDAAL
|
|---|
| |