| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6298 |
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| Symbol | |
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| ID | 6280096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2560853 |
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| End bp | 2562796 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617353 |
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| Product | X-Pro dipeptidyl-peptidase domain protein |
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| Protein accession | YP_001889996 |
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| Protein GI | 187920964 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG TTTTTTCCCG CAGCGAGGCG CTTCCCGCTG ATTCGACGCT CAACCCGTTT
TGCGACGTCA TGGTGCCGAT GCGCGACGGC GTGCGGCTCG CCACCGACGT GTACTTCCCC
GCCGGTTACC GCGCGGGCAT CGACGCGCCG CTGCCCACGA TTCTCGAACG CACGCCGTAC
GGCAAATCCG ATATCTCGCG TTCGGAGATC CATCACGGCG AGCCGCCCGC GAATCGCGCC
GACGTGGCCC GCTATTTCGC GGCGCGCGGC TATGCCGTGG TGCTGCAGGA CTGCCGGGGG
CGCTACAACT CCGAGGGCAC GTTCACCAAA TACATCGCCG AAGGGCCGGA CGGTTTCGAC
ACGATCGAAT GGATCACGCA ACAACGCTGG TCGAACGGCA AGGTCGGCAC GATGGGGCTC
TCGTACGCAG CTCACACGCA GCTTGCCGCC GCCTGCCTGA ATCCGCCGGG ACTCGCGTGC
ATGGTGCTGG ACTCCGGCGG TTTCGCCAAC GGCTATCGCT GCGGCATTCG CCAGGGCGGC
GCTTTCGAAC TGAAGCAGGC GACGTGGGCC TTCAACCGTG CAAAGAACAG CACCACGGCC
GCCGAGAATC CGCTGGTTGC GGCGGCGCTG AATGCGAGCG ATCTGCGTCA ATGGTTTGCG
CGGATGCCGT GGCGGCCAGG TCACTCGCCG CTGGCGACGG TGCCGGAATA CGAGCGCTAT
CTGTTCGAGC AATGGACGCA CGACGTGTTC GACGAATACT GGAAACAGCC AGGCATCTAT
GCTGAAGGCT ATTACGACAC CATGACGCGC GTGCCGACGG TGCTGATGTC GAGCTGGTAC
GACGCCTATG TGCGCAGCAC GCTCGATAAT TTCGCCGCGT TATCCGGCAC GCCCGGCGCT
CCGGCGTATC TGATCATGGG TCCGTGGCTG CACGGCGACC GCAACGTGTC GTACAGCGGC
GACGTTGAAT TCGGACCCGA CGCGGTGATC GAAGGCCAGA TTGCGAAAGA CTGGCTGGCG
TTCCGCGCCG ACTGGTTCGA CCGCTGGCTG CAACCGAACG GCGCGTCGAA CGGGGCAGGC
GATGCCATTG CACGTATCTT CGTGATGGGC GGCGGCAGTG GAGCGCGTAA TCCGCAGGGC
CGCATGGAGC ACGGCGGACG CTGGGTCAAG TCAGCGCAAT GGCCGTTGCC CGGCACGCGC
CTCACGCCGT TTTATCTTGC CGGGGACGGC TCGCTTTCGG CATCGAATGA CACTTTGCAG
GCGGCGCCCG CGGCGACCTC GTATTCGTTC GATCCGTCCA ATCCGGTGCC GACGATCGGC
GGCGCGCTGA CCTCGGGTGC GCCGGTTTTC GAAGGCGGCG CGTTCGACCA GCGCGAGGAC
GCGCGCTTTT TCGGCACGCG GCACATGGGT ATGCCGCTCT CGGCACGCTC CGATGTTCTC
GTGTTTCAGA CAGACCCGCT CGAAGAAGAC GTCGCCGTGA TTGGGCCGAT TGTCGTGAAG
CTGTGGATTT CGTCCGATGC GCCCGACACC GACTTCACCG CGAAGCTGAT CGACGTCTAT
CCGCCAAATG CGGATTACCC GCACGGCTAC GCGATGAACC TGACCGATGG CATTTTCCGC
TGCCGCTTTC ACGAATCGTG GACCGAGCCG CGTGCCCTCG AAGAAGGCCG CGTCTACGCG
ATTGAAATCG AACCGTTCGC CACGGCCAAT CTGTTCAGAC GCGGCCACCG CATCCGCCTC
GATATATCGA GCAGCAATTT CCCGCACTTC GACGTCAACC CGAATAGCGG CGAGGCGCCC
GCGCTGGCGC GCACACCACG CGTCGCGGTG AACCGTGTGC ATTTCGGCGC GGGTCAAGCG
TCGCACGTCG TACTGCCGCT CGTCCCTGTG GCTTCGCTCG AAGCCATGCA GGCGAGCCCG
GCGGATAGCC GCAAAACCGG CTAG
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| Protein sequence | MTDVFSRSEA LPADSTLNPF CDVMVPMRDG VRLATDVYFP AGYRAGIDAP LPTILERTPY
GKSDISRSEI HHGEPPANRA DVARYFAARG YAVVLQDCRG RYNSEGTFTK YIAEGPDGFD
TIEWITQQRW SNGKVGTMGL SYAAHTQLAA ACLNPPGLAC MVLDSGGFAN GYRCGIRQGG
AFELKQATWA FNRAKNSTTA AENPLVAAAL NASDLRQWFA RMPWRPGHSP LATVPEYERY
LFEQWTHDVF DEYWKQPGIY AEGYYDTMTR VPTVLMSSWY DAYVRSTLDN FAALSGTPGA
PAYLIMGPWL HGDRNVSYSG DVEFGPDAVI EGQIAKDWLA FRADWFDRWL QPNGASNGAG
DAIARIFVMG GGSGARNPQG RMEHGGRWVK SAQWPLPGTR LTPFYLAGDG SLSASNDTLQ
AAPAATSYSF DPSNPVPTIG GALTSGAPVF EGGAFDQRED ARFFGTRHMG MPLSARSDVL
VFQTDPLEED VAVIGPIVVK LWISSDAPDT DFTAKLIDVY PPNADYPHGY AMNLTDGIFR
CRFHESWTEP RALEEGRVYA IEIEPFATAN LFRRGHRIRL DISSSNFPHF DVNPNSGEAP
ALARTPRVAV NRVHFGAGQA SHVVLPLVPV ASLEAMQASP ADSRKTG
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