| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6294 |
|---|
| Symbol | |
|---|
| ID | 6277471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2556309 |
|---|
| End bp | 2557220 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642617349 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001889992 |
|---|
| Protein GI | 187920960 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACATA GCGCCACCGT TTTTGCATGG CGGCCTGACC GCAATACCAC GTCGGGCATC
GTGCTGCGCA GTCTGTTCGG CAAGCCGGCT GTTGCCGTGG CGACTTGCGT ATGTCTTCTG
CTCGTCGCGA TCGCGCTGCT CGCGCCGTGG ATCGCGCCGC AGAATCCGTA CGATCTCGCC
GCGCTCAATC TCGTCGACGG CCGCCTCCCG CCCGGCGCGC GAGGCGTGAA CGGTCACCTG
TATCTGCTCG GCAGCGACGC GCTCGGGCGC GACATGTTCG CCGCCATGAT GTACGGACTG
CGCATCAGCC TTGGCGTGGG CTTGCTGAGC GGCGTCTTCG CGATGTCGCT CGGCACGACG
CTTGGTCTTG TGGCCGCGTA CTTCGGAGGT CGCGTCGACA CGCTCGTGAT GCGCGCCGTC
GATCTGATGC TTGGCTTTCC GACGATCCTC GTCGCGCTGA TGATGCTCGC CATTCTCGGC
CAGGGTGTCG ACAAGGTGAT CCTCGCGCTG GTGGTCGTGC AGTGGGCGTA TTTCGCGCGC
ACCGTGCGGG CCGTCGCCGC CGTCGAACGC CGCAAGGAGT ATATGGAGGC CGCGTTTTGC
CTCGGCCTGA GCCACCGGCG CGCGCTGTTC AGCCAGTTGC TGCCGAACTG CCTGCCGCCC
GTCATCGTCA TTGCGCTCGT ACAGATTGCC GCCGCCATTT CAGCCGAAGC GACCTTGAGC
TTTCTCGGTA TCGGCCTGCC GGTCACACAA CCCTCGCTGG GTCTGCTGAT CGCAAACGGC
TATCAGCAAT TGATCGCGGG CTTCTACTGG ATCAGCGTCT TTCCCGGCCT GTTGCTGCTC
GTGCTGGTGT TCAGCATGAA TATCGTCGGC GACAGTCTGC GCGAAGCATT GAACCCGCGT
TTGCAGAAAT AG
|
|---|
| Protein sequence | MRHSATVFAW RPDRNTTSGI VLRSLFGKPA VAVATCVCLL LVAIALLAPW IAPQNPYDLA
ALNLVDGRLP PGARGVNGHL YLLGSDALGR DMFAAMMYGL RISLGVGLLS GVFAMSLGTT
LGLVAAYFGG RVDTLVMRAV DLMLGFPTIL VALMMLAILG QGVDKVILAL VVVQWAYFAR
TVRAVAAVER RKEYMEAAFC LGLSHRRALF SQLLPNCLPP VIVIALVQIA AAISAEATLS
FLGIGLPVTQ PSLGLLIANG YQQLIAGFYW ISVFPGLLLL VLVFSMNIVG DSLREALNPR
LQK
|
|---|
| |