| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6290 |
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| Symbol | |
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| ID | 6278399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2552511 |
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| End bp | 2553785 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642617345 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001889988 |
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| Protein GI | 187920956 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG CAGTGAACGC TGACGGCGCC GCGCGTTCGA TCGCCGAGGC GGTCGCTCGT
CGCAGTTACG GCAAGCTCGT CGCGCTGCTG GCAATGCGCA CGCGCGACGT CGCCGCAGCC
GAGGACGCGC TGGCCGACGC GTTTGCGGCC GCGCTCGCCG ACTGGCCGGA GCGTGGCTGC
CCCGCGAACC CCGAAGCGTG GCTGATGACG GTCGCGCGCC GCCGGGCGAT CGACGGCGCG
CGGCATCGCC GCGTCGGCGA CGAAGTGACG AACCAGCTCA CGATCCTCGC CGACGAGATC
GACGAGCGTG AAGCCGGCGC GTTGCCCGAC CGGCGGCTCG CGCTGCTGTT CGCGTGCACG
CACCCCGCGC TCGAAGCCGC GATCCGCACG CCGCTGATGC TGCAAGTCGT GCTGGGGCTC
GAAGCGAAGA CGATTGCTTC CGCGTTCCTG ATGTCGCCCG CCGCGATGAG CAAACGTCTC
GTGCGGGCGA AGAACAAGAT CCGCGCAGCG GGCATTCCGT TCAGCGTGCC CGGGCGCGAA
GAGTTGCCGG ACCGGCTCGC CGCGGTGCTG GAAGCGGTCT ATGCGGCCTA TGCGGAAGGA
TGGACCGACC CGCTCGGCCG CGATACTGAG AGGCGCGATC TCACCGGCGA GGCGCTGTTT
CTTGCACACC TGCTCGTCGA ATTGCTGCCC GAGGAGCCGG AGACGCTGGG TTTGCTCGCG
CTCATGCTGT ATGCGCAGGC GCGTTGCGAC TCGCGACGCG ATGCAGCCGG CGACTATGTG
CCGCTGTCGG CCCAGGATCC TGCTACATGG AACGCGTCGA TGCTCGACGC CGCCGACGCA
TTGCTGCGGC GCGCGAGCGC ATTCAATGCA ATCGGACGTT TTCAACTGGA GGCCGCGCTG
CAGTCGGCGC ATGTACACCG TTGCCGCACG CATCGCTCGA ACTGGGACGA GATCGTGCAG
CTCTACGATG CACTGTTCGC GATTGCGGCG TCGCCGGTGG TCGCGGTGAA CCGCGCGCTC
GCGCTGGCGG AACGGGACGG CCCGCAGGCG GCGCTCGATG CGCTCGAGCC GTATGCCGAC
GATCCGCGGC TGGCCGACTA CCAGCCGTAC TGGGCCGCGC GCGCCGACCT GCTCGCGCGC
GTCGGCGCAA CGGCTGAAGC GCTCGGCGCG TACGATCTCG CGATTGGACT TGAGCGCGAT
CCTTCCGTGC GCCGCTTTTT GCAACGCAAG CGCATCGAGT TGTCGTCGGC GAGAGGCTGG
ATTGGCACCT CGTGA
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| Protein sequence | MAAAVNADGA ARSIAEAVAR RSYGKLVALL AMRTRDVAAA EDALADAFAA ALADWPERGC
PANPEAWLMT VARRRAIDGA RHRRVGDEVT NQLTILADEI DEREAGALPD RRLALLFACT
HPALEAAIRT PLMLQVVLGL EAKTIASAFL MSPAAMSKRL VRAKNKIRAA GIPFSVPGRE
ELPDRLAAVL EAVYAAYAEG WTDPLGRDTE RRDLTGEALF LAHLLVELLP EEPETLGLLA
LMLYAQARCD SRRDAAGDYV PLSAQDPATW NASMLDAADA LLRRASAFNA IGRFQLEAAL
QSAHVHRCRT HRSNWDEIVQ LYDALFAIAA SPVVAVNRAL ALAERDGPQA ALDALEPYAD
DPRLADYQPY WAARADLLAR VGATAEALGA YDLAIGLERD PSVRRFLQRK RIELSSARGW
IGTS
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