Gene Bphyt_6288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6288 
Symbol 
ID6277308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2548117 
End bp2549310 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID642617343 
Producthypothetical protein 
Protein accessionYP_001889986 
Protein GI187920954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGA ATACACCTGC GGCAAGACTC CCTGTTTCTA ACACTGAACT CACGGTCCGT 
CGTAAATTTC TGACGTCCTT GCTGGCCGGC GGCGGCGCGT TCGTGCTCGC TGCATGCGGC
GGCGGTGGCG ATGCCGCCAG TCCCGACGCG GTCGCGGACC GCTATCGACG CGGCGGCGGC
GCATCGAACC CGAGCGGCGC CAGTTCGTCG AGCGGCGCGA GCGCGCCGGC AACGGCAAGC
TCCCCGGCAA CGGCAAGCTC GCCGGCTGGC GCGAGCTCGC CGACCAGCAC CCAAGGTGTT
CTTCTCGACA CGTCTTTCGG CGTAAAGGGC GATGGGACCA CCAACGACCG CGTTGCACTT
CAGCGCGCAA TCGACGGCTC CATTGGACAG ATTTTGCTGA TTACCGGCCA GAGCCGGATC
GACGTGGCCG GCCTCGACCT GCGCACCAAT AGCCACGTGC GCTTTGCAAG CGGCGCTTCG
ATCAAACTGC TCGCGCATAA TACCGACACG TATGAAATCC TGCGCTTGGC GGACGTCAAT
AACGTCACGC TCGAAAGCCC GTATCTCGAC GGCAGCAAGG AATTGAATTC GGCGAAGTCG
GGCGAGTGGG GGATGGGGAT TTCGATTAAT GGCGCAACGA ATTGCACCAT TACGTCTCCG
ACCACGATCA ATTGCTGGGG CGACGGCATT TACATCAATA ACAGCGATAG CAAGAGCAAC
GGCTACAGCA CGAACATCAC GGTCAATTCG CACCACGCGA CCGGATGCCG TCGCCAGGGT
GTATCGATTA TCAGCGGCAG CGGCATTACG TTTAATAGCC CGCTTTGGGA AAATATCGGC
GGAACGGCCC CCGGTGCCGG TCTCGATATC GAACCGAATG ACAATACCGC TGTGTTTCAA
AACATCCGCA TCGTCAGCCC GACGACGAAT AACTGCGCCG GCGGCGGGAT TAACGTTTAT
TTTGGCTTCT TCCCGGGTCC GGTCAACAAG ACTGTCAGCA TCAGCATTAC CGGCCATACG
GATACGGGAA GTCCCGGCGG CTCATTCAAC GTTCAGGGCC TTCAATTGAA TGGCTACGTC
GTGAATGGAT CGATTACCAG CGCCAACCCG GTCTGGAAGA AAACCGGGCT GAGCCTGGAA
GACTGGGACA AGAATGGCCC GACGGTGACG GTCAGCAACG CGCGCATCGG CTGA
 
Protein sequence
MIKNTPAARL PVSNTELTVR RKFLTSLLAG GGAFVLAACG GGGDAASPDA VADRYRRGGG 
ASNPSGASSS SGASAPATAS SPATASSPAG ASSPTSTQGV LLDTSFGVKG DGTTNDRVAL
QRAIDGSIGQ ILLITGQSRI DVAGLDLRTN SHVRFASGAS IKLLAHNTDT YEILRLADVN
NVTLESPYLD GSKELNSAKS GEWGMGISIN GATNCTITSP TTINCWGDGI YINNSDSKSN
GYSTNITVNS HHATGCRRQG VSIISGSGIT FNSPLWENIG GTAPGAGLDI EPNDNTAVFQ
NIRIVSPTTN NCAGGGINVY FGFFPGPVNK TVSISITGHT DTGSPGGSFN VQGLQLNGYV
VNGSITSANP VWKKTGLSLE DWDKNGPTVT VSNARIG