| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6253 |
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| Symbol | |
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| ID | 6277643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2508454 |
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| End bp | 2509002 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642617308 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001889951 |
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| Protein GI | 187920919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTC AAGTTAGACA TACCGCGATT CCTGACGTGA AGGTCATCGA GCCGCAAGTG
TTCGGAGATT CACGGGGCGC TTTTCTCGAG ACGTTCAATC AGGTCGAGTT CGAAGAGAAA
GTGGCGCGCG GTTATACGTT TGTGCAAGAC AATCATTCCA TTTCAGCGCA GGGCGTTCTG
CGAGGCCTGC ATTACCAGAT CCAGCATCCG CAAGGCAAGC TGGTTCGAGT TGTAGTGGGT
GAGGTGTTCG ACGTTGCGGT CGATCTGCGG CGCTGGTCGT CCACGTTCGG GCGATGGGTC
GGCGTGCGGC TGTCCGCGTC GAACCGGCGG CAGCTATGGA TTCCGCCGGG CTTTGCGCAC
GGCTTCGTCG TATTGTCGGA TGTCGCCGAG TTCCTTTATA AAGCGACTGC ATTCTGGCAC
CCGGAACACG AACGTACTTT GCGTTGGGAC GATCCGGATA TTGCTGTCGA ATGGGAACTG
AATGGTGTTC CGTTCGTTTC GTCGAAAGAC GCCGCCGGTA GCCGCTTTAA CGAGGCTGAG
GTCTACTGA
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| Protein sequence | MTIQVRHTAI PDVKVIEPQV FGDSRGAFLE TFNQVEFEEK VARGYTFVQD NHSISAQGVL
RGLHYQIQHP QGKLVRVVVG EVFDVAVDLR RWSSTFGRWV GVRLSASNRR QLWIPPGFAH
GFVVLSDVAE FLYKATAFWH PEHERTLRWD DPDIAVEWEL NGVPFVSSKD AAGSRFNEAE
VY
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