Gene Bphyt_6242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6242 
Symbol 
ID6279263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2495276 
End bp2496595 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content67% 
IMG OID642617297 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001889940 
Protein GI187920908 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CACCGAGCCT CGAGCAGGCG CCACCGAGAA TCCGCCGCGC CCAGATCGTG 
GCGCTCACGC TGCTGATGGT GAGCGGCATC GTCAACTATC TGGACCGCGG CACGCTCGCA
GTTGCCAATC CGCTGATCCG TCACGATCTC GGCCTGTCGC TTGGAGAAAT GGGGCTGCTG
CTTTCCGCGT TCTCGTGGAG TTACGCGCTC TTCCAGTTGC CGGTGGGCGG TCTCGTCGAC
CGCATCGGGC CGCGCAAGCT GCTCGGCATC GGCCTGATCG TGTGGTCGCT CGCGCAGGCG
TCGGGCGGAT TCGTCTCGAC CTTCGGCTGG TTCATCCTCG CGCGGATCGT GCTCGGCATC
GGCGAGGCGC CGCAGTTTCC GTCGGCGGCC CGGGTGGTCA GCAACTGGTT TCCGCTGCGC
GCGCGCGGCA AGCCGACCGG CATTTTCAAC TCGGCGTCGC CGCTCGGCAC GGCGCTCGCA
CCGCTGTGTC TGTCGGTTCT CGTGGTGCAG TTTCACTGGC GCTGGGCCTT CATCGTGACC
GGCGTGGTCG GTCTCGTCGT GGCGCTCGTG TGGCTCGCGG TGTACCGCGA CCCCGTCAAG
GCCACCATGA CCGAAGCCGA ACGGCACTAT CTCGAAGGCG ACGACGCGGA CCGCAAGCCG
GCCCCCACGG TCACCTTTGC CGAATGGCGC TCGCTGTTTT CGCACGGCAC CACGTGGGGC
ATGCTGATCG GTTTCTTCGG CTCGGTGTAT CTGAACTGGG TGTACCTCAC GTGGCTGCCT
GGCTATCTGA CGATGGAACG CCACATGAGC CTGATGCACA CGGGCGTCGC GGCATCGATA
CCGTTCTTCT GCGGCTTTCT GGGCTCGCTG ACGGCCGGCT GGTTCTCCGA TCTCATCACG
AGCCGCAGCA CGAGCCCGGT CGCGAGCCGC CGCAATGCGG TGGTGATCGC GATGCTCGGC
ATGGTCGCGT TCACGATTCC CGCAGCGCTC GTCGAAAGCA ACACGATCGC GATCGTGTGC
ATCTCGGTGG TGATCTTTCT GGCGAATGCC GCATCCGCGA GTTCATGGGC GCTCGCCACT
GCCGCCGCGC CGCCGAACCG CGTCGGCTCG CTCGGCGCGA TTCAGAACTT CGGCGGTTTT
CTGGGCGGCG CGCTCGCCCC GATCCTGACG GGCTATATCG CGCAGAGCTG GTCGTTCGTC
CCCGCGCTGC TGACGGCCGC GGGCATCGCG TTTATCGGCG CGATGAGCTA CCTCCTGCTG
GTGCGCAAGC CGATCGAAGA CCCGTCCACC CCAACCGAAC CCGTGCGAGC GCCCGCGTGA
 
Protein sequence
MSATPSLEQA PPRIRRAQIV ALTLLMVSGI VNYLDRGTLA VANPLIRHDL GLSLGEMGLL 
LSAFSWSYAL FQLPVGGLVD RIGPRKLLGI GLIVWSLAQA SGGFVSTFGW FILARIVLGI
GEAPQFPSAA RVVSNWFPLR ARGKPTGIFN SASPLGTALA PLCLSVLVVQ FHWRWAFIVT
GVVGLVVALV WLAVYRDPVK ATMTEAERHY LEGDDADRKP APTVTFAEWR SLFSHGTTWG
MLIGFFGSVY LNWVYLTWLP GYLTMERHMS LMHTGVAASI PFFCGFLGSL TAGWFSDLIT
SRSTSPVASR RNAVVIAMLG MVAFTIPAAL VESNTIAIVC ISVVIFLANA ASASSWALAT
AAAPPNRVGS LGAIQNFGGF LGGALAPILT GYIAQSWSFV PALLTAAGIA FIGAMSYLLL
VRKPIEDPST PTEPVRAPA