Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6242 |
Symbol | |
ID | 6279263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2495276 |
End bp | 2496595 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642617297 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889940 |
Protein GI | 187920908 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA CACCGAGCCT CGAGCAGGCG CCACCGAGAA TCCGCCGCGC CCAGATCGTG GCGCTCACGC TGCTGATGGT GAGCGGCATC GTCAACTATC TGGACCGCGG CACGCTCGCA GTTGCCAATC CGCTGATCCG TCACGATCTC GGCCTGTCGC TTGGAGAAAT GGGGCTGCTG CTTTCCGCGT TCTCGTGGAG TTACGCGCTC TTCCAGTTGC CGGTGGGCGG TCTCGTCGAC CGCATCGGGC CGCGCAAGCT GCTCGGCATC GGCCTGATCG TGTGGTCGCT CGCGCAGGCG TCGGGCGGAT TCGTCTCGAC CTTCGGCTGG TTCATCCTCG CGCGGATCGT GCTCGGCATC GGCGAGGCGC CGCAGTTTCC GTCGGCGGCC CGGGTGGTCA GCAACTGGTT TCCGCTGCGC GCGCGCGGCA AGCCGACCGG CATTTTCAAC TCGGCGTCGC CGCTCGGCAC GGCGCTCGCA CCGCTGTGTC TGTCGGTTCT CGTGGTGCAG TTTCACTGGC GCTGGGCCTT CATCGTGACC GGCGTGGTCG GTCTCGTCGT GGCGCTCGTG TGGCTCGCGG TGTACCGCGA CCCCGTCAAG GCCACCATGA CCGAAGCCGA ACGGCACTAT CTCGAAGGCG ACGACGCGGA CCGCAAGCCG GCCCCCACGG TCACCTTTGC CGAATGGCGC TCGCTGTTTT CGCACGGCAC CACGTGGGGC ATGCTGATCG GTTTCTTCGG CTCGGTGTAT CTGAACTGGG TGTACCTCAC GTGGCTGCCT GGCTATCTGA CGATGGAACG CCACATGAGC CTGATGCACA CGGGCGTCGC GGCATCGATA CCGTTCTTCT GCGGCTTTCT GGGCTCGCTG ACGGCCGGCT GGTTCTCCGA TCTCATCACG AGCCGCAGCA CGAGCCCGGT CGCGAGCCGC CGCAATGCGG TGGTGATCGC GATGCTCGGC ATGGTCGCGT TCACGATTCC CGCAGCGCTC GTCGAAAGCA ACACGATCGC GATCGTGTGC ATCTCGGTGG TGATCTTTCT GGCGAATGCC GCATCCGCGA GTTCATGGGC GCTCGCCACT GCCGCCGCGC CGCCGAACCG CGTCGGCTCG CTCGGCGCGA TTCAGAACTT CGGCGGTTTT CTGGGCGGCG CGCTCGCCCC GATCCTGACG GGCTATATCG CGCAGAGCTG GTCGTTCGTC CCCGCGCTGC TGACGGCCGC GGGCATCGCG TTTATCGGCG CGATGAGCTA CCTCCTGCTG GTGCGCAAGC CGATCGAAGA CCCGTCCACC CCAACCGAAC CCGTGCGAGC GCCCGCGTGA
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Protein sequence | MSATPSLEQA PPRIRRAQIV ALTLLMVSGI VNYLDRGTLA VANPLIRHDL GLSLGEMGLL LSAFSWSYAL FQLPVGGLVD RIGPRKLLGI GLIVWSLAQA SGGFVSTFGW FILARIVLGI GEAPQFPSAA RVVSNWFPLR ARGKPTGIFN SASPLGTALA PLCLSVLVVQ FHWRWAFIVT GVVGLVVALV WLAVYRDPVK ATMTEAERHY LEGDDADRKP APTVTFAEWR SLFSHGTTWG MLIGFFGSVY LNWVYLTWLP GYLTMERHMS LMHTGVAASI PFFCGFLGSL TAGWFSDLIT SRSTSPVASR RNAVVIAMLG MVAFTIPAAL VESNTIAIVC ISVVIFLANA ASASSWALAT AAAPPNRVGS LGAIQNFGGF LGGALAPILT GYIAQSWSFV PALLTAAGIA FIGAMSYLLL VRKPIEDPST PTEPVRAPA
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