| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6192 |
|---|
| Symbol | |
|---|
| ID | 6279235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2442812 |
|---|
| End bp | 2444200 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642617247 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001889890 |
|---|
| Protein GI | 187920858 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT TCGATGCCTT CCACCTCGCC AGGCTGCAGT TTGCGTTCAC TGTTTCATTT
CACATTATTT TCCCCGCGAT CAGTATAGGA ATGGCCAGTT TCCTCGCCGT GCTGGAGTGG
CGTTGGCTGC TGACCGGCGA CGTGGTCTAC AAGGACATGT TTCTGTTCTG GTCGAAGATC
TTTGCGGTCG GCTTCGGCAT GGGCGTGGTG TCGGGCGTCG TGATGGCCTA CGAGTTCGGC
ACCAACTGGA GCGGCTTTTC CACCGTTGCC GGCAACATCA CAGGGCCGCT GCTGACTTAT
GAAGTGTTGA CGGCGTTCTT TCTCGAGGCC GGCTTTCTCG GCGTGATGCT GTTCGGCTGG
CAGCGCGTGG GTCCGCGCGC GCACTTCTTC GCCACGCTGA TGGTGGCGGC AGGCACGTTG
ATGTCCACCT TCTGGATTCT CGCGTCGAAC AGCTTCATGC AGACGCCGCA AGGATTCGCC
ATGGAGAACG GCCGGATCGT GCCGGTCGAC TGGCTGAAAG TGATTTTCAA CCCGTCGTTT
CCGTACCGGC TCGCGCATAT GACGATCGCC GCGTTCATCG TCGCGGGCTT CATGGTCGCC
GCGTGCGGGG CGTGGCATCT GCTGCATGGC CGGCGCGACG GCCCGATCAA GCGCAGTTTT
TCGATGGCGC TGTGGATTCT GCTTTTGCTG ACGCCGATCC AGATTTTCGT CGGCGATGCG
CACGGCCTGA ACACCCGCGA ATATCAGCCC GCCAAGATCG CGGCGATAGA GGGACTGTGG
GAAACCGAGA AAGGCGGCAC GGCGCTCAAT CTGGTCGGTC TGCCCGACAT GAAGGCGGAA
GTGACACGCT ACACGCTGCA AATTCCGCAT CTAGGCAGCC TCATTCTGAC CCATAGCTGG
GACGGAGAAA TCCGCGGGCT CAAGACATTT CCCGCCAGAG ACCGTCCGTA TTCGCCGATC
ATCTTCTGGA CCTTCCGGAT CATGGCGGGC CTCGGTATGT TGATGCTGCT GACCGCGTTG
CTCGGGCTGC TGCTCAGACT GAAAGGCCGC CTCTACGAGA CGCGCTGGTA TCAGGTTTTC
GTGCTGTGCA TGGGCCCGTC GGGAATCGTC GCGCTATTGG CCGGGTGGGT CACGACGGAG
GTCGGCCGCC AGCCCTGGAC GGTCTACGGC GTTCTGCGCA CTGAAGACTC GCTCTCGCCG
ATCAGCGCCC AGCAAGCGGG TGTTTCATTG CTGATCTTTG TGCTGGTGTA CTTCCTGGTA
TTCGGTATGG GGGTCTACTA CATGCTCAAG ATGATGAAGC GCGGACCCGA GGAGCATGTC
GACGCCCGCC AGTCCGTCAA GCATCCGGTG TTGCGCAATC GTCCGCTGGA CGCACTGGAA
CGGGAGTGA
|
|---|
| Protein sequence | MEIFDAFHLA RLQFAFTVSF HIIFPAISIG MASFLAVLEW RWLLTGDVVY KDMFLFWSKI
FAVGFGMGVV SGVVMAYEFG TNWSGFSTVA GNITGPLLTY EVLTAFFLEA GFLGVMLFGW
QRVGPRAHFF ATLMVAAGTL MSTFWILASN SFMQTPQGFA MENGRIVPVD WLKVIFNPSF
PYRLAHMTIA AFIVAGFMVA ACGAWHLLHG RRDGPIKRSF SMALWILLLL TPIQIFVGDA
HGLNTREYQP AKIAAIEGLW ETEKGGTALN LVGLPDMKAE VTRYTLQIPH LGSLILTHSW
DGEIRGLKTF PARDRPYSPI IFWTFRIMAG LGMLMLLTAL LGLLLRLKGR LYETRWYQVF
VLCMGPSGIV ALLAGWVTTE VGRQPWTVYG VLRTEDSLSP ISAQQAGVSL LIFVLVYFLV
FGMGVYYMLK MMKRGPEEHV DARQSVKHPV LRNRPLDALE RE
|
|---|
| |