| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6188 |
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| Symbol | |
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| ID | 6279259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2438240 |
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| End bp | 2438977 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617243 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001889886 |
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| Protein GI | 187920854 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGCA CCTTCAAACG CAGCGTAGCC GGCCGTCGCG TGGTCGACGT CGAGGGTCCG
GGCGGAACGG AGTTGTCCGG CGTCGGCACG GGGCATCAGA CCGCGATTGC CGCGCCTCAA
CAAGGCGTCG TGGCCAGGCT CGCGGAGGTC AAGCGCCTGG TCGAGTTCAC CGTGCCGTTC
GAATTGCAGC GCGAGGCGAT CGACAGCGTG CTGCGCGGCG CGAACGACGC CGACTGGCAG
CCCGCCAAAG ATGCAGCGAA AGAGCTCGCC TATGCCGAAG ATCGCGCGAT CTTCGACGGC
TATCAGGCAG CGGGGATCGG CGGGATTCGC GAAGGCTCGT CGAATGCGCC GCTCGCGCTG
CCCGCCGACA TCGGCGATTA TCCGCACGCA ATCGGCAATG CGCTGGAAGA GCTACGGCTC
GCCGGCGTGG ACGGTCCTTA TTCCGTGCTG CTCGGCGCCG ACGCCTACAC GGCGCTCAGC
GAGGCACGCG ACCAGGGTTA TCCGGTGATC GAGCACATCA AGCGGATCGT GAACGGCGAC
ATCATCTGGG CACCCGCGCT GACCGGCGGC AGCGTGCTCT CCACGCGAGG CGGCGACTTC
GAGTTACACC TCGGCGAAGA CCTGTCGATC GGCTATCTCA GCCACACCGA CTCAGTAGTG
CGCCTCTATT TGCGCGAGAC GCTGACATTC CTGATGTTGA CGAGCGAAGC CTCGGTGTCG
TTGACGCTCG CTGAATAA
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| Protein sequence | MARTFKRSVA GRRVVDVEGP GGTELSGVGT GHQTAIAAPQ QGVVARLAEV KRLVEFTVPF
ELQREAIDSV LRGANDADWQ PAKDAAKELA YAEDRAIFDG YQAAGIGGIR EGSSNAPLAL
PADIGDYPHA IGNALEELRL AGVDGPYSVL LGADAYTALS EARDQGYPVI EHIKRIVNGD
IIWAPALTGG SVLSTRGGDF ELHLGEDLSI GYLSHTDSVV RLYLRETLTF LMLTSEASVS
LTLAE
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