| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6181 |
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| Symbol | |
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| ID | 6277483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2431274 |
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| End bp | 2432383 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617236 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001889879 |
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| Protein GI | 187920847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCC GCCATCTCAT CAGCATAGCC ATTGGAATCC TCGCAGCATC GGGGATGCTG
GCGGCGACTA CTCATCCTGC CAATGCCGAA GAACTGAATG TCTACAACTG GTCGGACAAT
ATCGCCGAGG ACACCGTGTC GGGCTTTCAG AAAGAAACCG GCATTCACAC GCGATACGAC
GTGTATGACG GCGACGACAC CTTGCAGGCA AAGTTGCTGA GCGGTTCCTC AGGCTATGAT
GTGGTGGTGC CGTCGTCCGC CTATGCCGCC AGGCAGATCG AAGCGGGGGT CTATCGCAAG
CTCGACAAGA GCAAGATTCC AAATCTGGCC AATCTGGATC CGGTGCTCAT GAAGATGCTG
GCATCCGCCG ATCCCGGCAA TCAGTACACG GTGCCCTGGT CATGGGGAAC GGACGGCATC
GGCTACAACG TCACGAAGGT CACGCAAATA CTAGGCAAGG ACGCGCCCTA CGATAGCTGG
GATCTGCTGT TCGATCCGCA ATACGTGTCC AAACTGAAAA CCTGCGGCGT TTCCGTGCTC
GACTCTCCAG AAGATGCTTT CTCGGTCGGC TTGATCTACC TGCACAAGGA TCCCAATAGC
ACTAACCCCG CCGACTATCA GGCCGTGTAC AAGCTGTTCA AAACGATCCG ATCGTACATC
ACCCAGTTCA ATTCATCCGG CTACATCAAC GACCTCGCCA ATAACGATGT CTGCCTCGCG
CTAGCATGGT CCGGCGACGC CGGTATCGCA AAGCGGCGCG CAGAGGAGGC ACACCGCGCC
TATGAGATTC GCTACGTCAT TCCCAAAGGC GACGGCGTGC TGTGGTTCGA TCTGATGGGC
GTGCCGAAAG ATGCGCCTCA TCCCGAAGCC GCAATGCAGT GGATCAACTA CATTCTTCAA
CCGAAGGTCA GCGCGGCGAT CACCAATCAG GTTTACTACC CGAACGCCAA TGCCGCCGCG
CGTGCTTATG TGAAACCGGC CATCCTCGAT AATGAAGCGG TCTATCCTCG CGGCGAGAAG
ATGAAATCGC TCACGCTGTC ACTGCCTTTG CCGGCCGAAA TCCTTCGCCT TCAAAACAGG
CTGTGGACGC AACTCAAAGC TGGGCGGTAA
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| Protein sequence | MTPRHLISIA IGILAASGML AATTHPANAE ELNVYNWSDN IAEDTVSGFQ KETGIHTRYD
VYDGDDTLQA KLLSGSSGYD VVVPSSAYAA RQIEAGVYRK LDKSKIPNLA NLDPVLMKML
ASADPGNQYT VPWSWGTDGI GYNVTKVTQI LGKDAPYDSW DLLFDPQYVS KLKTCGVSVL
DSPEDAFSVG LIYLHKDPNS TNPADYQAVY KLFKTIRSYI TQFNSSGYIN DLANNDVCLA
LAWSGDAGIA KRRAEEAHRA YEIRYVIPKG DGVLWFDLMG VPKDAPHPEA AMQWINYILQ
PKVSAAITNQ VYYPNANAAA RAYVKPAILD NEAVYPRGEK MKSLTLSLPL PAEILRLQNR
LWTQLKAGR
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