Gene Bphyt_6177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6177 
Symbol 
ID6277650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2427414 
End bp2428445 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID642617232 
Productalpha/beta hydrolase fold 
Protein accessionYP_001889875 
Protein GI187920843 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC AGATCAATTT GCGGCGTCGT CGTCTGCTCG GGACGACGGT TGCGGGCCTC 
AGCCTGATGG AACTGGGACT GAGCGGACTT GCCAACGCGC AGTCCAATAG CACGAAGACG
GGATCGAGCG TCGCCTCGTT CGACAACCTC AAGCAGATCA ACGCGGGCGC GCTCAACATC
GGCTATGCCG AAGCGGGTCC GCAGAACGGA CCGGTCGTGA TCCTGCTGCA CGGCTGGCCC
TACGATATCC ATGCGTTTGC CGAAGTCACG CCGTTGCTGG CGGCAGCCGG CTATCGCGTG
ATCGTGCCGT ATCTGCGCGG TTATGGCACG ACGCGGTTCC TGTCCGCGGA TACGCCGCGC
AACGGACAGC AGGCGGTCGT GGCGGTCGAC ATCATCGCGT TGATGGATGC GCTGAAGATC
GACAAGGCGA TTTTCGGCGG CTTCGACTGG GGCGCACGCA CGGTGAATAT CATCGCCGCG
CTGTGGCCGG AGCGATGCAA GGCGATGGTC TCGGTGAGCG GCTACCTGAT CGGCAGTCAG
GAAGCGAACC GCACGCCGCT GCCGCCGAAA GCGGAGCTGG CCTGGTGGTA TCAGTTCTAC
TTCGCGACGG AGCGCGGCGC GGCGGGTTAC GACGCGAATC GTCACGAGTT CAACAAGCTG
ATCTGGCACA CGGCCTCGCC GAAATGGAAT TTCGACGATG CGACTTTCGA GCGCTCGGCG
CAATCGTTCA GCAATCCGGA TCATGTCGCG GTGGTGATTC ACAACTATCG CTGGCGTCTG
GGGCTGGTGA AGGGCGAGCC GCAGTACGAC GATCTGGAGA AGCGCCTGGC CGCGGCGCCG
ACGATTGCCG TGCCGACAAT CACAATGGAA GGCGACGCGA ACGGCGCGCC GCATCCCGAT
CCGGCGGCGT ACGCGAAGAA GTTCACCGGT AAATACGCGC ACCGGAATAT CGGCGGCGGT
GTCGGACATA ACCTGCCGCA GGAAGCGCCG AAAGCATTCG CCGATGCAGT GATCGACGTC
GCACGTTTCT AG
 
Protein sequence
MSDQINLRRR RLLGTTVAGL SLMELGLSGL ANAQSNSTKT GSSVASFDNL KQINAGALNI 
GYAEAGPQNG PVVILLHGWP YDIHAFAEVT PLLAAAGYRV IVPYLRGYGT TRFLSADTPR
NGQQAVVAVD IIALMDALKI DKAIFGGFDW GARTVNIIAA LWPERCKAMV SVSGYLIGSQ
EANRTPLPPK AELAWWYQFY FATERGAAGY DANRHEFNKL IWHTASPKWN FDDATFERSA
QSFSNPDHVA VVIHNYRWRL GLVKGEPQYD DLEKRLAAAP TIAVPTITME GDANGAPHPD
PAAYAKKFTG KYAHRNIGGG VGHNLPQEAP KAFADAVIDV ARF