Gene Bphyt_6173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6173 
Symbol 
ID6278401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2422182 
End bp2423213 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID642617228 
Productalpha/beta hydrolase fold 
Protein accessionYP_001889871 
Protein GI187920839 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC AGATCAATTT GCGGCGTCGT CGTCTGCTCG GGACGACGGT TGCGGGCCTC 
AGCCTGATGG AGCTGGGACT GAGCGGACTT GCCAACGCGC AGTCCAATAG CACGAAGGCG
GGATCGAGCG TCGCCTCGTT CGACAACCTC AAGCAGATCA ACGCGGGCAC GCTCAGCATC
GGCTACGCCG AAGCGGGCCC GCAGAACGGA CCGGTCGTGA TCCTGCTGCA CGGCTGGCCC
TACGATATCC ACGCGTTTGC CGAAGTCACG CCGTTGCTGG CGGCAGCCGG CTATCGCGTG
ATCGTGCCGT ATCTGCGCGG TTATGGCACG ACGCGGTTCC TGTCCGCGGA TACGCCGCGC
AACGGCCAGC AGGCGGTCGT GGCGGTGGAC ATCATCGCGT TGATGGATGC GTTGAAGATC
GACAAGGCGA TTTTCGGCGG CTTCGACTGG GGCGCACGCA CGGTGAATAT CATCGCCGCG
CTGTGGCCGG AGCGATGCAA GGCGATGGTC TCGGTGAGCG GCTACCTGAT CGGCAGTCAG
GAAGCGAACC GCACGCCGCT GCCGCCGAAA GCGGAGCTGG CGTGGTGGTA TCAGTTCTAC
TTCGCGACGG AGCGCGGCGC AGCGGGTTAC GACGCGAATC GCCACGAGTT CAACAAACTG
ATCTGGCACA CCGCATCGCC AAAATGGAAA TTCGATGATG CGACTTTCGA ACGCTCGGCG
CAATCGTTCA GCAATCCGGA CCATGTCGCG GTGGTGATTC ACAACTATCG CTGGCGTCTG
GGGCTGGTGA AAGGCGAGCC GCAATACGAC GATCTGGAGA AGCGCTTGGC CGCGGCGCCG
ACGATTGCCG TGCCGACCAT CACAATGGAA GGCGACGCGA ACGGCGCGCC GCATCCCGAT
CCGGCGGCGT ACGCGAAGAA GTTCACCGGC AAGTACGCGC ACCGGAATAT CGACGGTGGG
GTCGGACATA ACCTGCCGCA GGAAGCGCCG AAAGCATTCG CCGATGCAGT GATCGACGTC
GCACGTTTCT AG
 
Protein sequence
MSDQINLRRR RLLGTTVAGL SLMELGLSGL ANAQSNSTKA GSSVASFDNL KQINAGTLSI 
GYAEAGPQNG PVVILLHGWP YDIHAFAEVT PLLAAAGYRV IVPYLRGYGT TRFLSADTPR
NGQQAVVAVD IIALMDALKI DKAIFGGFDW GARTVNIIAA LWPERCKAMV SVSGYLIGSQ
EANRTPLPPK AELAWWYQFY FATERGAAGY DANRHEFNKL IWHTASPKWK FDDATFERSA
QSFSNPDHVA VVIHNYRWRL GLVKGEPQYD DLEKRLAAAP TIAVPTITME GDANGAPHPD
PAAYAKKFTG KYAHRNIDGG VGHNLPQEAP KAFADAVIDV ARF