Gene Bphyt_6172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6172 
Symbol 
ID6277734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2421651 
End bp2422112 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID642617227 
Productprotein of unknown function DUF1452 
Protein accessionYP_001889870 
Protein GI187920838 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.714343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AATGGTTTTC GAAGTTCTCA AGCTTCCTTT CCACCATGAC CGGCAGGCCG 
GCCACCTTTG TGCTGGCCGT CCTGATGGTG ATCGTCTGGG CCCTCACGGG CCCGCTCTTT
CACTACAGCG ATACGTGGCA ACTCGTGATC AACACGTCGA CGACGATCGT CACGTTTCTG
ATGGTCTTCC TGATCCAGAA CACCCAGAAC CGCGACACCG CCGCGATGCA GATCAAGCTC
GACGAGTTGA TCCGCGCATT GGCAGGGGCT CACAACGCCC TGCTCGATCT CGAAGAACTC
GAGGAAAAAG ACTTGACGCG TTTTCGCAAA CACTACGAAA GACTGGCTAA CGAAGCGCGG
ATCGCGCTGC GTGCCGGCGG CAGCGACACC GATTCGCCCT TCGTCGACAA TCGCGATGAC
CGTGACGAAG AGCGGCCAGG CGGCAAGGCG CGGGGCGGCT AA
 
Protein sequence
MSGKWFSKFS SFLSTMTGRP ATFVLAVLMV IVWALTGPLF HYSDTWQLVI NTSTTIVTFL 
MVFLIQNTQN RDTAAMQIKL DELIRALAGA HNALLDLEEL EEKDLTRFRK HYERLANEAR
IALRAGGSDT DSPFVDNRDD RDEERPGGKA RGG