Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6172 |
Symbol | |
ID | 6277734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2421651 |
End bp | 2422112 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617227 |
Product | protein of unknown function DUF1452 |
Protein accession | YP_001889870 |
Protein GI | 187920838 |
COG category | [S] Function unknown |
COG ID | [COG5478] Predicted small integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.714343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCA AATGGTTTTC GAAGTTCTCA AGCTTCCTTT CCACCATGAC CGGCAGGCCG GCCACCTTTG TGCTGGCCGT CCTGATGGTG ATCGTCTGGG CCCTCACGGG CCCGCTCTTT CACTACAGCG ATACGTGGCA ACTCGTGATC AACACGTCGA CGACGATCGT CACGTTTCTG ATGGTCTTCC TGATCCAGAA CACCCAGAAC CGCGACACCG CCGCGATGCA GATCAAGCTC GACGAGTTGA TCCGCGCATT GGCAGGGGCT CACAACGCCC TGCTCGATCT CGAAGAACTC GAGGAAAAAG ACTTGACGCG TTTTCGCAAA CACTACGAAA GACTGGCTAA CGAAGCGCGG ATCGCGCTGC GTGCCGGCGG CAGCGACACC GATTCGCCCT TCGTCGACAA TCGCGATGAC CGTGACGAAG AGCGGCCAGG CGGCAAGGCG CGGGGCGGCT AA
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Protein sequence | MSGKWFSKFS SFLSTMTGRP ATFVLAVLMV IVWALTGPLF HYSDTWQLVI NTSTTIVTFL MVFLIQNTQN RDTAAMQIKL DELIRALAGA HNALLDLEEL EEKDLTRFRK HYERLANEAR IALRAGGSDT DSPFVDNRDD RDEERPGGKA RGG
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