Gene Bphyt_6170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6170 
Symbol 
ID6277652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2419923 
End bp2421494 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content67% 
IMG OID642617226 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_001889869 
Protein GI187920837 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGAG CCGAACAGAT CGAACTTGCG CTAGCGCCGA GACCGGAAGG CGTGCCGCTT 
CAGCGCTGGC TCTACGACGA GCTGCGCCAG GCGATCCTGA CAGCGACGTT GCCACCGTGC
GCGCGCCTGC CTTCCACACG CGATCTCGCA GCGAGGTTTC GACTGTCGCG CGGGACGGTG
CTGGGCGTTT TCGCGCAGCT TGAGGCGGAA GGGTATCTAT CCGGCGCGGT GGGACGAGGC
AGTTTCGTTG CGGCGGAACT GCCGGACCGG CGCATCGACA GCGGCGAGCG GACGTCGCCC
GGAAAGCGCG CTGGCAACAA CGGTACGCAA CCGCGCGACG TCGCGTTGTC GACGCGCGGC
CGTTTGCTCG CGCGCAGCGC GTTTCAGCTC AGCGGCCGCA CTCATCCGGC GCGCGCGTTT
CGCGCCAGCC AGCCCGATCT CGACGCGTTT CCCTTCGAAC TGTGGGCGCG GCTCGCGGCA
AACCGGGTGC GTCGCGCGCG GCGGGATCTG CTCGGCGACG GCGAGGCACA AGGATATCGG
CCGCTGCGCG AAGTGATCGC CGCTTATGTC GGCCCGTCGC GCGGTATTCG ATGTTCGGCG
GACAACGTGG TGGTGTTGGG CAGCGTTCAG CAGGCGATCG ATCTGAGCGC TCGCCTCCTG
CTCGATCCCG GCGACACTGC GTGGATGGAA GATCCCGGTT ATCCCGGCGC CCGTTTCGTG
CTCGAAGCCG CGGGCGCGCG AGTGATCGGC GTGCCGGTCG ATACAGCCGG CGTCGATGTG
TCATGGGCTC GCCAGCACCC CGCGGCAGCG CGTCTCGCCT ATGTCACCGC CGGGCGTCAG
GCGCCGCTAG GTCCGCCGCT CGCGCTCGAA CGGCGGCTCT CGCTGCTCGA ATGGGCGCGC
GAGCGAGGCG CCATCATCAT CGAGGACGAC TACGACAGCG AGTACCGCTT CGAGGGTCAC
CCGCTCGCCG CGATGAAGAG CCTCGACGAC CACGGACACG TGATCTACTG CGGCACCTTC
AGCAAACTGC TGTTTCCCGC TTTGAGGACC GCGTACGCGA TCTTGCCCGA CCGATTGATC
GAACCGTTCG TGACCGCGCT GTCGTCCACG GCACGGCATG TTCCCACCGA TCAGCAATCC
GTGCTGCACG ACTTTATCGC CGACGGCCAT TTCGGCCGGC ACATACGGCG CATGCGCATG
CTCTATGGCG AACGAGCCGA GGCACTGACG TCGGCGCTCG AGCGGCATCT TTCGGGTTTG
CTTGCGCTTG CGCCGATCGT GGCGGGCCTC GACGCGCCCG CGTTTCTGCC GCGAGACGCC
GACGACACCG ACGCCGCGCG GCGAGCGGCA CGCGAAGGCA TCGAGACGCG TCCGCTGTCG
CTATACGCGA TCGACCGTGC CGCGCCGCCG GGGCTCGTGC TCGGATTTGC TTCAATCGGT
GTCGAGGAAA TAGAGGCCGG CGTGATTGGT CTTGCTCGGG CGCTGACGCG CCGCAAACGC
AACGTTGCAA CAGGATTCGC CGATGCACAC CGATATCCGT CAGGCGTTGA CCGAGTTGCG
CCGGACACTT AG
 
Protein sequence
MRRAEQIELA LAPRPEGVPL QRWLYDELRQ AILTATLPPC ARLPSTRDLA ARFRLSRGTV 
LGVFAQLEAE GYLSGAVGRG SFVAAELPDR RIDSGERTSP GKRAGNNGTQ PRDVALSTRG
RLLARSAFQL SGRTHPARAF RASQPDLDAF PFELWARLAA NRVRRARRDL LGDGEAQGYR
PLREVIAAYV GPSRGIRCSA DNVVVLGSVQ QAIDLSARLL LDPGDTAWME DPGYPGARFV
LEAAGARVIG VPVDTAGVDV SWARQHPAAA RLAYVTAGRQ APLGPPLALE RRLSLLEWAR
ERGAIIIEDD YDSEYRFEGH PLAAMKSLDD HGHVIYCGTF SKLLFPALRT AYAILPDRLI
EPFVTALSST ARHVPTDQQS VLHDFIADGH FGRHIRRMRM LYGERAEALT SALERHLSGL
LALAPIVAGL DAPAFLPRDA DDTDAARRAA REGIETRPLS LYAIDRAAPP GLVLGFASIG
VEEIEAGVIG LARALTRRKR NVATGFADAH RYPSGVDRVA PDT