| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6156 |
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| Symbol | |
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| ID | 6279144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2407320 |
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| End bp | 2408426 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642617213 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001889856 |
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| Protein GI | 187920824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA CGATCTGTTC GCTCAACCGT TTCGAGGACC CCGTCGTGAT CAAGAAGCCC
ATGTTGCGCC CGCTTGCCGC AGTTCTGATC CTCGGTGTCG CGAATCTCGC GCCCGCGTGT
TTGACGCCCG CGTTTGCCGC CGCCGGCAAG ATCACTTTCG TCTCCCAGGG CGGGACCTAT
CAGGAAGCGC AGACCAAGGC GATTCTCGAC CCCGCTGCGA AGCTGCTCAA CATCACGGTG
AACCAGGACA GCATTCCGGA CGCGTGGCCG CAGATCAAAG CCCAGGCCGC GACCGGCAAG
CCGATCTGGG ACGTGGTCGA CACGCCTACG TCCAACTGCC TGCGCGGCGG CAAGGAAGGT
CTGCTGGAAA AGCTGGACTT CTCGAAGATT CCGAATGCGG CGGCCATGCC GGAGAAATAC
CGCACGCCAT ATTCGGTCGC GTATGAGTTC TATTCGACGG TGATCGGCTA CAACAAGAAG
TCGCTGAAAA AAGTGCCGCA GAGCTGGGCC GATTTCTGGA ACGTGAAGGC ATTCCCCGGC
ACGCGCGCAT TGCGTAACGA TCCGCAGACC GTGCTCGAAG CCGCGCTGCT CGCCGACGGT
GTGCCGCGCG ACAAACTCTA TCCGCTCGAC GTCGATCGCG CGTTCAAAAA GCTGCAGCAG
ATCAAGCCGG ACGTGACCGT GTGGTGGACC TCGGGCGGCC AGTCGGCGCA ATTGCTGCAC
GACGGCGAAG TGGACATGAC GATGATCTGG AACGGCCGCG CAAGCGCGGT GCGTAAGGAC
AACCCCGACG TCGACTTCAC CTTCAACGAT GGCATTCTGC AGGACACGCA ACTCTGCGTG
CTGAAGAATG CGCCGAATCT GCCTGAGGCG ATCAAGTTCA TCAACGCCGC GGTCTCGCCG
GAATTGCAGG CCAACTTGCC GCTTTATATC GACTACGGCC CGGGCAACCC GGCTGCATTC
AAGACGGGCA AGATCGACGC CAAGCGCGCA AGCGAATTGC CGAGCTCGCC GGAGAATGCG
TCGAAACAGG CATTGATGTC GGAGGAATGG TGGGCGTCGG ACGCCGGCGT CCAGGCGAAG
GCGCGCTGGC TCAAGTTCAT GCAGTAA
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| Protein sequence | MTSTICSLNR FEDPVVIKKP MLRPLAAVLI LGVANLAPAC LTPAFAAAGK ITFVSQGGTY
QEAQTKAILD PAAKLLNITV NQDSIPDAWP QIKAQAATGK PIWDVVDTPT SNCLRGGKEG
LLEKLDFSKI PNAAAMPEKY RTPYSVAYEF YSTVIGYNKK SLKKVPQSWA DFWNVKAFPG
TRALRNDPQT VLEAALLADG VPRDKLYPLD VDRAFKKLQQ IKPDVTVWWT SGGQSAQLLH
DGEVDMTMIW NGRASAVRKD NPDVDFTFND GILQDTQLCV LKNAPNLPEA IKFINAAVSP
ELQANLPLYI DYGPGNPAAF KTGKIDAKRA SELPSSPENA SKQALMSEEW WASDAGVQAK
ARWLKFMQ
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