Gene Bphyt_6144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6144 
Symbol 
ID6279317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2393594 
End bp2394559 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID642617201 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001889844 
Protein GI187920812 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.969752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGA TCGTTTTTCT GGACCGCTCG ACCCTCGCGC CGCAGATCGT GTTGCGTGAA 
CTGCGCTTCG AGCATCAGTT GATCGAGCAC GATCGCACTA CGCCGGAGCA AGTGATCGAG
CGACTGGCCG GCGCGTCGAT TGCGATTACC AACAAGGTGG CGCTGAGCGC CGAAGTGCTG
GAGCAGTTGC CGCAGTTGAA GCTCGTCGCG GTGGCCGCGA CCGGCACGGA TTGCGTCGAC
AAGGCGGCGG CTCAACGGCT CGGCATTGCG GTGAGCAATA TTCGCGGCTA CGCGATCAAC
ACCGTGCCCG AGCATACCTT CGCGCTGATC CTCGCGCTGC GGCGCAATCT GGTCGCTTAT
CGCGACGACG TGCTCGCCGG CGAGTGGCAG AAGTCCGGGC AGTTCTGTTT CTTCACACAC
GCGATTCACG ATCTGGCCGG CGCGCGGCTC GGCATCATCG GCGAAGGGGT GCTGGGGCAG
CGTGTGGCGG AACTCGGCAA AGCCTTCGGC ATGCAGCCGA TGTTCGCCGC GCACAAAGGA
CGCGAAGGAC TCGGCCCGCT ATACACGCCA TGGGACGAAG TGCTCGCGAC GAGCGACATC
ATCACCGTGC ACAGTCCGCT CACGCCGCAA ACGCGCAATA TGCTCGCCAT GCCCGAGTTT
CGCGCGATGA AGCGCCGGCC GTTGATCATC AACACGGCGC GCGGCGGACT GGTGGATGAA
GCCGCGCTAG TCCAGGCGCT CGACGAAGGA TTGATCAGCG GCGCGGGTTT CGACGTGACC
GCAGGGGAGC CACCCGCCGA CGATAATCCG CTGTTGCGCG CCGCCGGCCG GCCGAATGTG
ATTCTGACGC CGCACGTGGC GTGGGCGTCG GACGACGCGC AGCAGAGTCT CGCGAATCAG
TTGATGGATA ACATCGAGAA CTTCGTCAAC GATACGCCGA TGAATCTGGT GAGCGGAGCG
TATTGA
 
Protein sequence
MHKIVFLDRS TLAPQIVLRE LRFEHQLIEH DRTTPEQVIE RLAGASIAIT NKVALSAEVL 
EQLPQLKLVA VAATGTDCVD KAAAQRLGIA VSNIRGYAIN TVPEHTFALI LALRRNLVAY
RDDVLAGEWQ KSGQFCFFTH AIHDLAGARL GIIGEGVLGQ RVAELGKAFG MQPMFAAHKG
REGLGPLYTP WDEVLATSDI ITVHSPLTPQ TRNMLAMPEF RAMKRRPLII NTARGGLVDE
AALVQALDEG LISGAGFDVT AGEPPADDNP LLRAAGRPNV ILTPHVAWAS DDAQQSLANQ
LMDNIENFVN DTPMNLVSGA Y