| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6136 |
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| Symbol | |
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| ID | 6279278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2381492 |
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| End bp | 2384536 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617193 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_001889836 |
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| Protein GI | 187920804 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTC GAGCCTGCGT CGACGCAGCG AGGACATGCA AGGCGCTCAC CAGCAGCCGT
GCGGCGCATC TCCCTATCAC GCTCATTGTC CCGGGACTTG AAAACGACAT GATTGAACTA
GGCCGCTTTC AAATCGATCT GGAAATGCGC ACCGTGCGGC GGGACGGCGA AGCGCTGCAT
CTGGGCTCAC GCGCCTTCGA CATTCTCGCC GTCATCGTGT CCGCCGCCGG CCGTCTCGTC
ACGAAAGACG AATTGATGAA TGCGGTGTGG CCGAACACCG TGGTGGAAGA GAACAACATC
CAGGTGCATC TCTCGGCCTT GCGCAAAATT CTCGGCGCGG ACCGGCATCT GATTCTCACC
GTGCCTGGCC GCGGCTATCA GCTTGTGCAT CGGCAACAGC CAGCCCCCGT GCGGCCCGCC
AGCCGGGTTT GCGCCGGGCG TCCTTTGCCT TCGCCGAAAA CCCGCCTCGT GGGCCGCGAC
GCGGCAATCG AACAGATCCA CGCGATGCTG CGGAAGGCGC ACGTGTTGAC GCTGGTGGGC
GCGGGCGGCA TCGGGAAAAC CAGTCTCGCG ATCGAAGCGG CGCGTCAAGC CGCGGAGGAT
TATGCCGAGC CCGTCTGCTT CGTCGAACTG GCTACGCTGA ACACGTTTGA CGGCGTGCTC
GGCGCCATTG CGGAAGGTTG CGGACTGCTC ACGGAAGGCA CGACGCCCGC CGTCGCGCAG
CTCGCCGCGG CGCTCGCGCA CAGGCACCGG CTGCTGGTGC TCGACAACGC CGAGCATGTG
ATCGGTTGCG TGGCCGAGAT CGTGGAGGCG TTGATCGCGG AAAGCGATTC GCTGCGTGTG
CTCGTGACGA GCCGTGAGCC GTTGCGCATC ATGCCCGAGG CGGTCTTTCG CGTGGATCCC
CTCGACGTGC CGCACTTGCA CTCCACCGAT GCGGAGATCC TGCAGCAGTC GGCCGTGAAT
CTGTTTCTGC TGCGCTCCAA CTCGTTGCAA TACAAAGTGG GGGCCGAGAG CGCCGAATTG
CGGCTGGTCG GCGAAATATG CCGCCGGCTG GACGGCATTC CGCTCGCGAT CGAACTGGCC
GCGGCACGCG TCGCGGCGCT CGGCGTGGAG GGCGTGCATC GGCGGCTGGA CGATCGCATG
GCGATTCTCG CGGGCGGCTA TCGCACCGCG CTGCCGCGCC ATCAGACCTT GCGCGCCACC
TTCGACTGGA GCTTCGCACT GCTCGACCAA GGCGCGCAGT CGCTCTTCAG ACGGATCGCG
GTGTTCGGCG GCGTGTTCAC GTTCGAGGCC ATGTGCGCGG TCGTGTGCGA TTCCACTTTG
ACGATCGAGA ACGCAATCAG CGGGATCAGC GAACTGCTGG CCAAATCGCT CGCCAATGTC
GAGTTCGACG GGCCGGTCGC GAAGTACCGG CTGCCCGAAT CGACGCGCGC CTATGCGCTG
GAGAAACTGC AGGCCGAAGG CGAGCACTCG GCGTTCGCTT CGCGCCACGC GCGCTATCTG
TCCACCTGCT TCCAGACGCG CACGGCGCCC ACCGTGTGCC GCGACGCCGA GCGCGCCACG
GCTCTGCACC ATACGTTCGA CGACGCGCGC GGCGCGTTCG ACTGGGCCTT CTCCGCCGAA
GGCGATGTGC GCCTCGGCGT CGATCTCGCC TCCAACCTCG CCGGTGCGCT GCTCGATGGC
GGCATGATCG CGGAGGCTTG CGCGCGCGCC GAACTCGCGG TCGGCGTGCT CGACCAGCTT
CCGGCCGCCA CGGTGGATGC CGCCTGCGAA ATGCGCGTGC GCGCGGCGTT GGCGACGGCC
TTGCCGTCCG TTCGCGGGTG CGTGGCGCGG TCGGCCGGAC TGTGGCGCGA TGTCTTCGCG
CTGGCGACCG CGAGCGGCGA CCAGGAGTTT CAGGCGCGCG CGCTGTGGGG CTTGTGGAAC
ATGATGCTCT CCAGCAGCAA CATCCACGAA TCGATGAAAT TCGCGCGGCA ATTCCAGCGT
CTCGGCGAAG ACGAAGGCAA TGCATGGCAA GCCGTTCTGG GCGACCAGGC GGTAGCCATA
TCGCTGCATT GTCTCGGGCA GCACGCGCAG GCCAAACGGA AATTGGAGGG CGCGCGCGAA
CGCTTTGCAC AGCTCGAGGG AAAGTCGCAG TGGGACAGCA CGTTCGCCGT CGATCCGCTC
GTCTATTGCA ACGGGACGCT CGCGCGGATC GCCTGGCTTC AGGGCAATCC CGGCGAGGCC
ATGACGCTGG TCGATGCGCT CGTGAATCTC GTGCGGCCTG AAACGATGGA GCCGTCGCTC
ACGCACATGC TCGGCACCGT GGCCGCGCCG CTCGCGCTGT TGTCGGGCGA TCTGAGCCGC
GCCGCGGCGT ATCTGGAGAT CATGCGTTCG CAGGCCGCGC TGCATCGCTT CGATGTCTGG
GTGGAGTATT GCGACTGCCT GAGCGCTTAC CGCGACATTC TCGACGGACA GGCGGCGCGG
GCGCTGCCTG TCCTGGCCGC ATCGCTCGAT GCGTTGATCG CGCGCGGCTT CCGGCGTGTC
GTCACGTTGT TTATCGTCGT CCATGCCGAG GCGCTCGTGA GCGTGGGACG AACGCGCGAA
GCGACCAGCC GTCTGAACGA CGCCTTGGCG TTTTGCCAGC AGCACGGCGA GTTGATGTTC
GTTCCGGAAA TCTGGCGCGT GCTGGGAATC GCCGCGCACG CCGAAGCCGG CGTGCAAGCC
GGCTCCGGCA AAGATTTCGG CGGCAAGCTC GCGCACGCGG CCACCTGTTT CGCGAAGGCG
CTCGAATCGT CCCGCGAGCA GGGCGCGAGA ATGTGGGAAC TGCGTGCGTC GCTGGCCATG
GCGGCGCTGC TGCGCGACGA AGGCCGCAAT GACGAAGCAA TCGAAGTGCT GGAACAGATC
GCACCGTATT TCGACACGTC ATCCAGTGCC ACCGATGTGC GGTCCCTGTT CGCGATGATC
AGGAGGCTGC GCTCGCGTCA TGGCAAAGCC ATCCAGCGCG CGGTGTTCGA ATTGCCGCAG
CGGGAAGCGC ATCGGTTTAA CGATTCCATC GAACGCGTTG GCTAG
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| Protein sequence | MAVRACVDAA RTCKALTSSR AAHLPITLIV PGLENDMIEL GRFQIDLEMR TVRRDGEALH
LGSRAFDILA VIVSAAGRLV TKDELMNAVW PNTVVEENNI QVHLSALRKI LGADRHLILT
VPGRGYQLVH RQQPAPVRPA SRVCAGRPLP SPKTRLVGRD AAIEQIHAML RKAHVLTLVG
AGGIGKTSLA IEAARQAAED YAEPVCFVEL ATLNTFDGVL GAIAEGCGLL TEGTTPAVAQ
LAAALAHRHR LLVLDNAEHV IGCVAEIVEA LIAESDSLRV LVTSREPLRI MPEAVFRVDP
LDVPHLHSTD AEILQQSAVN LFLLRSNSLQ YKVGAESAEL RLVGEICRRL DGIPLAIELA
AARVAALGVE GVHRRLDDRM AILAGGYRTA LPRHQTLRAT FDWSFALLDQ GAQSLFRRIA
VFGGVFTFEA MCAVVCDSTL TIENAISGIS ELLAKSLANV EFDGPVAKYR LPESTRAYAL
EKLQAEGEHS AFASRHARYL STCFQTRTAP TVCRDAERAT ALHHTFDDAR GAFDWAFSAE
GDVRLGVDLA SNLAGALLDG GMIAEACARA ELAVGVLDQL PAATVDAACE MRVRAALATA
LPSVRGCVAR SAGLWRDVFA LATASGDQEF QARALWGLWN MMLSSSNIHE SMKFARQFQR
LGEDEGNAWQ AVLGDQAVAI SLHCLGQHAQ AKRKLEGARE RFAQLEGKSQ WDSTFAVDPL
VYCNGTLARI AWLQGNPGEA MTLVDALVNL VRPETMEPSL THMLGTVAAP LALLSGDLSR
AAAYLEIMRS QAALHRFDVW VEYCDCLSAY RDILDGQAAR ALPVLAASLD ALIARGFRRV
VTLFIVVHAE ALVSVGRTRE ATSRLNDALA FCQQHGELMF VPEIWRVLGI AAHAEAGVQA
GSGKDFGGKL AHAATCFAKA LESSREQGAR MWELRASLAM AALLRDEGRN DEAIEVLEQI
APYFDTSSSA TDVRSLFAMI RRLRSRHGKA IQRAVFELPQ REAHRFNDSI ERVG
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