| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6109 |
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| Symbol | |
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| ID | 6277962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2349850 |
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| End bp | 2351322 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617166 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001889809 |
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| Protein GI | 187920777 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.949426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG CATTGACACG CAATGAACTG ATTCGCCCGC AGAACCTGAT CGACGGAGCA
TGGACCGGCG CCGCCGACGG CGCCCGCTTC GCCGTCACCA ACCCGGCCAC CGGCGAGACG
ATTGTCGAAG TCGCCGACAG CGGCGCCGCT GACGCGCGCG CCGCCACCGA CGCCGCAGCC
CGCGCGTTCC CCGCCTGGCG CGACACGCTG CCTCGCGAGC GCGCCGAGAT TCTGCGCCGC
TGGCATGCGC TGATCGTCGC CAATACCGAC GACCTCGCGA AGCTGATGTC GATGGAACAG
GGCAAGCCGC TCGCGGAGGC CCGCGGCGAA GTCGCTTACG GCGCGTCGTA CGTGGCCTGG
TTCGCCGACG AAGCGACCCG CATCTACGGC GATCTGATTC CGCAACAGCA GCGCGGCAAG
CGCATGAGCG CGGTGAAGGA ACCGGTCGGC GTAATCGCCG CGATCACGCC GTGGAATTTC
CCGCTGGCGA TGATCGCCCG CAAGATCGCG CCCGCGCTCG CGGCGGGTTG CACCGTGGTC
GCCAAGCCCG CCGAAGACAC GCCGCTCACC GCCCTCGCCC TCGCCGTGCT CGCTCAGGAA
GCTGGTCTGC CAGACGGCGT GCTGAACATG CTGTCGGCGT CGCGCGAACA AGGCATTGCC
GCCGTTGCCG ATTGGCTCGC CGACTCGCGG GTGCGCAAAA TAACCTTCAC AGGTTCGACG
CCGGTTGGCA AGCATCTCGC GCGCGAATCC GCGGGCACGC TGAAGAAGCT CTCGCTGGAA
TTGGGCGGTA ACGCGCCCTT CATCGTGTTC GACGACGCCG ATCTCGACGC GGCCGTCACC
GGCCTGATGG CAGCGAAATT CCGCAATGGC GGCCAGACCT GCGTGTGTCC GAACCGCGTC
TATGTGCAGG CGGGTGTCTA TGAGCGCTTC GCCGATCTGC TCGCGAAACG CGTCGGCGCG
CTGAAAGTTG CGCCTGCAAC CGACCCGCAA GCGCAAATCG GTCCGATGAT CAACGAGCGC
GCGATCCAGA AGATTGCCCG TCACGTGGAA GACGCCGTCA AACACGGCGC GAAGGTGCTG
GTGGGCGGCA AGCGCCTGAC CGAACTCGGC CCGAACTACT ACGCGCCGAC CGTGCTGACG
GACGCGCGGG ACGACATGCT CGTCAGCTGC GAGGAGACCT TCGGCCCGGT CGCGCCGCTA
TTCCGTTTCA ACGAAGAAGC CGAAGCGATC CGTCTCTCCA ACGACACGCC GTTCGGCCTG
GCCGCCTACT TCTATACGCA GGACGTGAGG CGTATCAATC GCGTGGCCGC GCAACTCGAA
GCGGGGGTAA TCGGCATCAA CGAAGGCGCG GTGTCGAGCG AAGCGGCGCC GTTTGGCGGC
GTGAAGGAAT CGGGCTATGG CCGCGAAGGG TCGAAGTATG GACTCGACGA CTACATGTCG
ATCAAATACA TGTGCCAGGG CGGGCTTGAT TGA
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| Protein sequence | MSLALTRNEL IRPQNLIDGA WTGAADGARF AVTNPATGET IVEVADSGAA DARAATDAAA
RAFPAWRDTL PRERAEILRR WHALIVANTD DLAKLMSMEQ GKPLAEARGE VAYGASYVAW
FADEATRIYG DLIPQQQRGK RMSAVKEPVG VIAAITPWNF PLAMIARKIA PALAAGCTVV
AKPAEDTPLT ALALAVLAQE AGLPDGVLNM LSASREQGIA AVADWLADSR VRKITFTGST
PVGKHLARES AGTLKKLSLE LGGNAPFIVF DDADLDAAVT GLMAAKFRNG GQTCVCPNRV
YVQAGVYERF ADLLAKRVGA LKVAPATDPQ AQIGPMINER AIQKIARHVE DAVKHGAKVL
VGGKRLTELG PNYYAPTVLT DARDDMLVSC EETFGPVAPL FRFNEEAEAI RLSNDTPFGL
AAYFYTQDVR RINRVAAQLE AGVIGINEGA VSSEAAPFGG VKESGYGREG SKYGLDDYMS
IKYMCQGGLD
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