| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6090 |
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| Symbol | |
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| ID | 6279019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2328450 |
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| End bp | 2330066 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617150 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001889793 |
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| Protein GI | 187920761 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.194048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGG AAAACTCGCA ACATGGCGCT CTTCATCTCG GCAGCGAGCT GGAGCGGTTG
ACTGCCAAAG GTGCGTCGCG GCGCGGTGTG CTGCGCGCGA TGGCGGCAGC CGGGATGATG
TCGGTGACGG GCGCCGGCCT GCTGACCGCG AGCGGTGAGG CCCTGGCGCA AGCCACCCCC
AGGCAGGGCG GCAAGATCCG CGTGGCGACG CAGTCGGCCT CCGCGGCTGA TACGCTCGAT
CCCGCGAAGG GCTCGCTCGG CACCGATTAC GCTCGTGGCT TCATGTTCTA CAACTGCCTG
ACCGAACTCG ACTCGCATCT CGGCGCGAAG ATGTCGCTGG CGACCTCGCT CGATACGAAA
GACGCCACCG TGTGGGTCGT CAAGCTGCGC AACGGTGTGC AGTTCCACGA CGGCAAAGCG
CTCGCGCCGG CGGACGTGGT CTACTCGATC ATGCGCCACA AGGATCCGGC CACGGCCTCC
AAGGCGAAGA CGCTCGCCGA TCAGATCAAG GACGTGAAGG CCACGGGCCC GAACGAAGTG
ACGATCACGC TGGTCGGTCC GAACGCCGAT CTGCCGGTGA TCCTTGCCAC CTCGCATTTC
CAGATCATCA AGGACGGCAC CAAGGATTTC AAAACGGCGA TCGGCACTGG CCCGTTCAAG
GTCAAGGAAT TCTCGCCGGG CGTGCGCACG ATCGGCGTGA GGAACGAGAA GTACTGGAAG
CCGGGCCTGC CGCACCTCGA CGAAGTCGAA CTGATCGGCA TCGGCGACGA ATCGGCGCGC
GTGAACGCGC TGCTTTCCGG CGACGTGCAG CTGATCAACG CGGTGAGCCC GCGTTCGACC
ACGCAGATCA AGGCTGCGAG CGGCTTCTCG GTGCTGGAGA CGAAGAGCGG CGTGTACACC
GACCTGATCG TGCGCGACGA TGGCGGCATT ACCGGCAACG ACGATTTCCG TCGCGGCATG
ATGTACCTGC AGGACCGCGA GCAGATGCGC CGCGCGATCT TCCAGGGTTA CGGAACCATC
GGCAACGATC AGCCTATCGA TCCGACCAAC AAGTACTACC TGGCCGGCTT GCCGCAGCGC
GCCTTCGATC CGGACAAAGC GAAGTTCCAT TTCCAGAAAG CCAAGGTGGG CAGCGCGCCC
ATCCAGATTT TCGCGTCGCC GGCGGCAGAA GGCTCGGTTG AAATGGCCAT GTTCCTTCAG
CAGGTCGCGC CGCAAGCCGG TCTGAATCTG CAGGTATCGC GCGTACCGGC CGACGGTTAC
TGGTCGAATC ACTGGATGAA GCATCCGTTG GGTTTCGGCA ATATCAACGC GCGGCCGAGC
GCCGACGTGA TCTTCACGCA GTTCTTCAAG TCGGACGCAC CGTGGAACGA GGCGAACTGG
AAGAGTCCGA AATTCGACCA GTTGCTGCTG CAGGCACGCG GCGAACCGGA CGACGTCAAG
CGCAAGCAGT TGTACGGTGA CATGCAGGTG CTGGTACACG AAACGGGCGG CATCGGCATT
CCGCTGTTCC AGAGTTCGCT CGACGCGTAC CCGAACAAGC TCAAGGGCCT CGGTTCCATT
CCTCTCGCCG GATTGATGGG CTACATGTTC GCGGAAAACG TCTGGCTCGA AGCCTGA
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| Protein sequence | MNKENSQHGA LHLGSELERL TAKGASRRGV LRAMAAAGMM SVTGAGLLTA SGEALAQATP
RQGGKIRVAT QSASAADTLD PAKGSLGTDY ARGFMFYNCL TELDSHLGAK MSLATSLDTK
DATVWVVKLR NGVQFHDGKA LAPADVVYSI MRHKDPATAS KAKTLADQIK DVKATGPNEV
TITLVGPNAD LPVILATSHF QIIKDGTKDF KTAIGTGPFK VKEFSPGVRT IGVRNEKYWK
PGLPHLDEVE LIGIGDESAR VNALLSGDVQ LINAVSPRST TQIKAASGFS VLETKSGVYT
DLIVRDDGGI TGNDDFRRGM MYLQDREQMR RAIFQGYGTI GNDQPIDPTN KYYLAGLPQR
AFDPDKAKFH FQKAKVGSAP IQIFASPAAE GSVEMAMFLQ QVAPQAGLNL QVSRVPADGY
WSNHWMKHPL GFGNINARPS ADVIFTQFFK SDAPWNEANW KSPKFDQLLL QARGEPDDVK
RKQLYGDMQV LVHETGGIGI PLFQSSLDAY PNKLKGLGSI PLAGLMGYMF AENVWLEA
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