| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6089 |
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| Symbol | |
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| ID | 6277373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2327415 |
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| End bp | 2328368 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617149 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001889792 |
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| Protein GI | 187920760 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.744523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAC ATGCGCAACG TCTCATCGCC GCGCGCCTTG GCCTCGCGCT GCTTACGCTG
CTGCTGGTGT CGGCAGTCGT GTTCGCCGTC ACCGGGCTGC TGCCCGGCGA CGCGGCCCAG
CAGGCGCTTG GCCAGGCGGC AACCCCCGAA GCCGTGGCTG CCCTGCGGCA TCAGTTCGGC
CTCGACCAGC CCGCGCTGCA ACGCTACCTG GTGTGGCTGC TTCATGTGGT CAGCGGCAAC
TTCGGCATCT CGCTGTCGAA CAATCTGCCC GTCAGTCAAC TGATCGCGAC GCGTCTGCCG
AACTCGCTGG TGCTGGCCGG ACTGACGGCG GTGGTCTCGG TGCCGGTAGC GCTGCTGATC
GGCATTTCGT CGGCGATGTT CCGCGGCTCG CTCCTCGACC GCACGCTCAA CGTGCTGACG
CTCTCCACGG TCGCGGTGCC GGAATTCCTG ATCGCCACCA TCGCGGTGCT GATCTTCGCG
GTGAAGCTGC GCTGGCTGCC GGCGCTGTCG TATCTGTCGG AAGTGCATTC GTTCGGCGCG
CTGCTGCGCA TCTACGCGAT GCCGGTGATG ACGCTGTGCT GCGTGCTGGT CGCGCAGATG
GCGCGCATGA CGCGCGCCGC GGTGCTCGAT CAGCTCAATT CGTCGTACGT GGAAATGGCC
TTGCTCAAGG GCGCCTCGCC GGTGCGCGTG GTGTGGCGGC ATGTGTTGCC GAACACCATC
GGACCGATCG CCAATGCCGT GGCGCTGAGC TTGTCGTATC TGTTCGGCGG CGTGGTGATC
GTCGAGTCGA TCTTCAATTA TCCCGGCCTC GCGAGCCTGA TGGTGGACGC GGTGACCAAC
CGCGACATGC CGCTCGTGCA GGGCTGCGTC ATGGTGTTCT GCGCGGCGTA TCTGGTGCTC
GTGCTGATCG CCGACCTGTG TCAAATCGTA TCCAACCCGA GGCTGCGTCG ATGA
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| Protein sequence | MKAHAQRLIA ARLGLALLTL LLVSAVVFAV TGLLPGDAAQ QALGQAATPE AVAALRHQFG
LDQPALQRYL VWLLHVVSGN FGISLSNNLP VSQLIATRLP NSLVLAGLTA VVSVPVALLI
GISSAMFRGS LLDRTLNVLT LSTVAVPEFL IATIAVLIFA VKLRWLPALS YLSEVHSFGA
LLRIYAMPVM TLCCVLVAQM ARMTRAAVLD QLNSSYVEMA LLKGASPVRV VWRHVLPNTI
GPIANAVALS LSYLFGGVVI VESIFNYPGL ASLMVDAVTN RDMPLVQGCV MVFCAAYLVL
VLIADLCQIV SNPRLRR
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